RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ZSWIM9Q86XI8 627 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 ATPAF2Q8N5M1 289 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 MFSD2AQ8NA29 543 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 SPC24Q8NBT2 197 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 EXD1Q8NHP7 514 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 GANCQ8TET4 914 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 EXOC2Q96KP1 924 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 KLHL32Q96NJ5 620 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 LENG8Q96PV6 779 aaPredicted RBP11.06□□□□□ -0.64
GCN1-202ENST00000547263 NUDCD1Q96RS6 583 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
GCN1-202ENST00000547263 IL12RB2Q99665 862 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 SUV39H2Q9H5I1 410 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 TMEM9BQ9NQ34 198 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 DYRK4Q9NR20 520 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 PPIL1Q9Y3C6 166 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 PCDHA3Q9Y5H8 950 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
GCN1-202ENST00000547263 COL5A1P20908 1838 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 hCG_1818297A0A087WSY0 165 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3DA0A087WVF3 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3IA0A087WXS9 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3EA0A087X179 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3KA0A087X1G2 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 A0A0U1RQJ8 604 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 CFAP69A5D8W1 941 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3FA6NER0 549 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3LB9A6J9 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 KRIT1O00522 736 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 FZD6O60353 706 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 SYPP08247 313 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3HP0C7X1 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 MX2P20592 715 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 GJC1P36383 396 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 SSR1P43307 286 aaKnown RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 MARCKSL1P49006 195 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 DNA2P51530 1060 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 SLC14A1Q13336 389 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 UGP2Q16851 508 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TMEM52BQ4KMG9 183 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3GQ6DHY5 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3CQ6IPX1 549 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TIGD7Q6NT04 549 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 PRPF39Q86UA1 669 aaKnown RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 NT5DC3Q86UY8 548 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 ZNF354CQ86Y25 554 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 TBC1D3Q8IZP1 549 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 CBARPQ8N350 705 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 CCDC112Q8NEF3 446 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 FAM174AQ8TBP5 190 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 UBE2Q2Q8WVN8 375 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 KRT35Q92764 455 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 SLC6A18Q96N87 628 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 CINPQ9BW66 212 aaPredicted RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 FSCN3Q9NQT6 498 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
GCN1-202ENST00000547263 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 PCDHGB2Q9Y5G2 931 aa11.05□□□□□ -0.64
GCN1-202ENST00000547263 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 A0A1B0GVT2 93 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 A0A1W2PQ67 120 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 A0A1W2PQU0 124 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 FAM47DPA6NHR8 397 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 PCNX2A6NKB5 2137 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 C4orf47A7E2U8 309 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 PRAMEF26H0Y7S4 382 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 APOL1O14791 398 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 ARHGAP6O43182 974 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 SPOPO43791 374 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 IPO7O95373 1038 aaKnown RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 PIGNO95427 931 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 KRT1P04264 644 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CFIP05156 583 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CD59P13987 128 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CSRP1P21291 193 aaKnown RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 CD38P28907 300 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 MMP12P39900 470 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 MMP13P45452 471 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 NR2C2P49116 596 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 COPS2P61201 443 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 RPS21P63220 83 aaKnown RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 IFI35P80217 286 aaPredicted RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 CCZ1BP86790 482 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 ADCY2Q08462 1091 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 RALGDSQ12967 914 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 KIF19Q2TAC6 998 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 SETMARQ53H47 684 aaPredicted RBP11.04□□□□□ -0.64
GCN1-202ENST00000547263 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 MARC1Q5VT66 337 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 SEL1L3Q68CR1 1132 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 FBXL19Q6PCT2 694 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
GCN1-202ENST00000547263 ABI3BPQ7Z7G0 1075 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms