RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 LRRN3Q9H3W5 708 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 MBNL1Q9NR56 388 aaKnown RBP12.94□□□□□ -0.34
SCAF11-208ENST00000546534 TMPRSS4Q9NRS4 437 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 ARHGEF38Q9NXL2 777 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 GPR34Q9UPC5 381 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
SCAF11-208ENST00000546534 LRRK2Q5S007 2527 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 ILVBLA1L0T0 632 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 CR2P20023 1033 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 GNA15P30679 374 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 CXCR3P49682 368 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 ELOCQ15369 112 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 SKIDA1Q1XH10 827 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 ARTNQ5T4W7 220 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 LVRNQ6Q4G3 990 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 LRRC31Q6UY01 552 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 FAM183BPQ6ZVS7 135 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 OR6K2Q8NGY2 324 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 USP7Q93009 1102 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 TM6SF2Q9BZW4 377 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 INTS2Q9H0H0 1204 aaKnown RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 EPN3Q9H201 632 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 WDCPQ9H6R7 721 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 ATP13A1Q9HD20 1204 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 HECAQ9UBI9 543 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-208ENST00000546534 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
SCAF11-208ENST00000546534 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CLEC18AA5D8T8 446 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 C9orf172C9J069 976 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 AREL1O15033 823 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 MMP20O60882 483 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 DAB1O75553 588 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CD160O95971 181 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ALPIP09923 528 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 HK3P52790 923 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 MAPK10P53779 464 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 KRT85P78386 507 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ARF5P84085 180 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ZFP36L1Q07352 338 aaKnown RBP12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ZNF805Q5CZA5 627 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 BRMS1LQ5PSV4 323 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CLEC18BQ6UXF7 455 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 HID1Q8IV36 788 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 Q8N9G6 341 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CLEC18CQ8NCF0 446 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 WNT2BQ93097 391 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-208ENST00000546534 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 SLC12A9Q9BXP2 914 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 EDEM3Q9BZQ6 932 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ADNPQ9H2P0 1102 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 TEX15Q9BXT5 2789 aa12.92□□□□□ -0.34
SCAF11-208ENST00000546534 A0A1W2PQC6 194 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 KRIT1O00522 736 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 TOR1BO14657 336 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 ERBB2P04626 1255 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 CTSEP14091 401 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 BLKP51451 505 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 ALG11Q2TAA5 492 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 LRRC73Q5JTD7 316 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 ZNF783Q6ZMS7 281 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 RD3Q7Z3Z2 195 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 RYBPQ8N488 228 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-208ENST00000546534 TP53I13Q8NBR0 393 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-208ENST00000546534 JPH3Q8WXH2 748 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-208ENST00000546534 SNX21Q969T3 373 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 ISG20Q96AZ6 181 aaKnown RBP12.91□□□□□ -0.34
SCAF11-208ENST00000546534 TMEM159Q96B96 161 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 ARHGEF26Q96DR7 871 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 C1orf74Q96LT6 269 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 GSDMAQ96QA5 445 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 NPY6RQ99463 290 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 MAN2B2Q9Y2E5 1009 aa12.91□□□□□ -0.34
SCAF11-208ENST00000546534 SCN8AQ9UQD0 1980 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 BECN2A8MW95 431 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 TM7SF2O76062 418 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 RASGRP1O95267 797 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 UGT2B4P06133 528 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 ITIH2P19823 946 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 SULT1E1P49888 294 aa12.9□□□□□ -0.34
SCAF11-208ENST00000546534 SLC6A3Q01959 620 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms