RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 STAT4Q14765 748 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 ZNF423Q2M1K9 1284 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 PIP4P1Q86T03 277 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 TTC7BQ86TV6 843 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 PQLC3Q8N755 202 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 TMEM145Q8NBT3 493 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 CALR3Q96L12 384 aaKnown RBP16.44■□□□□ 0.22
CIT-212ENST00000543239 RNF157Q96PX1 679 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 BAG1Q99933 345 aaPredicted RBP16.44■□□□□ 0.22
CIT-212ENST00000543239 SLC32A1Q9H598 525 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 SUV39H2Q9H5I1 410 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 ATP13A3Q9H7F0 1226 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 TM7SF3Q9NS93 570 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 PCDHGB2Q9Y5G2 931 aa16.44■□□□□ 0.22
CIT-212ENST00000543239 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 TLR4O00206 839 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 NEMP1O14524 444 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 MUSKO15146 869 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 SLC31A1O15431 190 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 SPINT1O43278 529 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 BUB1BO60566 1050 aaPredicted RBP16.43■□□□□ 0.22
CIT-212ENST00000543239 CEACAM1P13688 526 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 CD59P13987 128 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 PRLRP16471 622 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 MX2P20592 715 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 COMTP21964 271 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 AKT2P31751 481 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 NOVA1P51513 510 aaKnown RBP16.43■□□□□ 0.22
CIT-212ENST00000543239 NXPH1P58417 271 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 ELP6Q0PNE2 266 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 MARC1Q5VT66 337 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 SEL1L3Q68CR1 1132 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 TIGD7Q6NT04 549 aaPredicted RBP16.43■□□□□ 0.22
CIT-212ENST00000543239 C11orf63Q6NUN7 778 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 RAD9BQ6WBX8 426 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 FAM174AQ8TBP5 190 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 ASB12Q8WXK4 309 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 FATE1Q969F0 183 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 SLC17A9Q9BYT1 436 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 IL21RQ9HBE5 538 aa16.43■□□□□ 0.22
CIT-212ENST00000543239 FNDC3AQ9Y2H6 1198 aaKnown RBP16.43■□□□□ 0.22
CIT-212ENST00000543239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.42■□□□□ 0.22
CIT-212ENST00000543239 C3orf70A6NLC5 250 aaPredicted RBP16.42■□□□□ 0.22
CIT-212ENST00000543239 BTNL10A8MVZ5 291 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 KRT1P04264 644 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 TIMP2P16035 220 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 CR2P20023 1033 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
CIT-212ENST00000543239 CCNCP24863 283 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 MMP13P45452 471 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 CCT8P50990 548 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 SCNN1BP51168 640 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 BCL2L1Q07817 233 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 HNRNPDQ14103 355 aaKnown RBP16.42■□□□□ 0.22
CIT-212ENST00000543239 IFI16Q16666 785 aaKnown RBP16.42■□□□□ 0.22
CIT-212ENST00000543239 UGP2Q16851 508 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 RALGPS1Q5JS13 557 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 CAMK1DQ8IU85 385 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 TMEM139Q8IV31 216 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 TEX26Q8N6G2 289 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 SPOCK2Q92563 424 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 KLK6Q92876 244 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ECHDC3Q96DC8 303 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 TSGA13Q96PP4 275 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 MGME1Q9BQP7 344 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ERVMER34-1Q9H9K5 563 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 GDF3Q9NR23 364 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 GGT7Q9UJ14 662 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ALG6Q9Y672 507 aa16.42■□□□□ 0.22
CIT-212ENST00000543239 ASCC3Q8N3C0 2202 aaKnown RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 H0Y8X5 98 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 YKT6O15498 198 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 SGCGQ13326 291 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 SUZ12Q15022 739 aaKnown RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 SLC9A4Q6AI14 798 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 PSAPL1Q6NUJ1 521 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 DBX2Q6ZNG2 339 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 PGBD5Q8N414 524 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 OXR1Q8N573 874 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 PLD5Q8N7P1 536 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 DENND6BQ8NEG7 585 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 DEFB124Q8NES8 71 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 MAML1Q92585 1016 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 HDAC11Q96DB2 347 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 ZNF830Q96NB3 372 aaPredicted RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 LENG8Q96PV6 779 aaPredicted RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 NUDCD1Q96RS6 583 aa16.41■□□□□ 0.22
CIT-212ENST00000543239 ELF4Q99607 663 aaPredicted RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
CIT-212ENST00000543239 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms