RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TRIM44Q96DX7 344 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 SEMA3CQ99985 751 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 GPR174Q9BXC1 333 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 SUSD2Q9UGT4 822 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 TTC7AQ9ULT0 858 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 RPL26L1Q9UNX3 145 aaKnown RBP18.97■□□□□ 0.63
VPS33A-205ENST00000541169 INVSQ9Y283 1065 aa18.97■□□□□ 0.63
VPS33A-205ENST00000541169 MUSKO15146 869 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 HTRA2O43464 458 aaPredicted RBP18.96■□□□□ 0.63
VPS33A-205ENST00000541169 PRLRP16471 622 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 TCP1P17987 556 aaKnown RBP18.96■□□□□ 0.63
VPS33A-205ENST00000541169 BCKDHBP21953 392 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 RGRP47804 291 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 KIAA0895LQ68EN5 471 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 ITPRIPL1Q6GPH6 555 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 ERAP2Q6P179 960 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 DARS2Q6PI48 645 aaKnown RBP18.96■□□□□ 0.63
VPS33A-205ENST00000541169 TTC7BQ86TV6 843 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 TRIM69Q86WT6 500 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 SLC35F6Q8N357 371 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 PAF1Q8N7H5 531 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 ARRDC3Q96B67 414 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 FEM1CQ96JP0 617 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 TEKT5Q96M29 485 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 NOD2Q9HC29 1040 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 FAM86C1Q9NVL1 165 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 SERGEFQ9UGK8 458 aa18.96■□□□□ 0.63
VPS33A-205ENST00000541169 THADAQ6YHU6 1953 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3DA0A087WVF3 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3IA0A087WXS9 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3EA0A087X179 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3KA0A087X1G2 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3FA6NER0 549 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 MEI4A8MW99 385 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3LB9A6J9 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 EPN2O95208 641 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3HP0C7X1 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 GNSP15586 552 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 PTPN3P26045 913 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 DHPSP49366 369 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 GNG11P61952 73 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 UGP2Q16851 508 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3GQ6DHY5 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3CQ6IPX1 549 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 KIAA1161Q6NSJ0 714 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 AADACL2Q6P093 401 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 DRICH1Q6PGQ1 229 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 PARS2Q7L3T8 475 aaKnown RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TMEFF1Q8IYR6 380 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TBC1D3Q8IZP1 549 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 CEP76Q8TAP6 659 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 DNASE2BQ8WZ79 361 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 RUBCNQ92622 972 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 ADGRE3Q9BY15 652 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 SLC25A51Q9H1U9 297 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 VPS45Q9NRW7 570 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 SEPT10Q9P0V9 454 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 DNPEPQ9ULA0 475 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 DMTF1Q9Y222 760 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-205ENST00000541169 TTLL3Q9Y4R7 772 aa18.95■□□□□ 0.62
VPS33A-205ENST00000541169 CEP192Q8TEP8 1941 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 WDFY4Q6ZS81 3184 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 UPK3BL1B0FP48 263 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 PRR5-ARHGAP8B1AHC4 643 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 UPK3BL2E5RIL1 263 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 RNF103O00237 685 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 NEMP1O14524 444 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 TRAFD1O14545 582 aaPredicted RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 LATO43561 262 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CEP104O60308 925 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 OPHN1O60890 802 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 HLA-DQB2P05538 268 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 GKP32189 559 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 TNNT3P45378 269 aaPredicted RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 MAXP61244 160 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 RPS21P63220 83 aaKnown RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 ZBTB17Q13105 803 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CCNG2Q16589 344 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 ARMC12Q5T9G4 340 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CYP2U1Q7Z449 544 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 PRPF39Q86UA1 669 aaKnown RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CAMK1DQ8IU85 385 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 SYT12Q8IV01 421 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CNTD1Q8N815 330 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 FRMD1Q8N878 549 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 SLC35B2Q8TB61 432 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 VOPP1Q96AW1 172 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 LRRC45Q96CN5 670 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 IMP4Q96G21 291 aaKnown RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 HSPA12BQ96MM6 686 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 AGAP3Q96P47 875 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 SRPK1Q96SB4 655 aaKnown RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 HERPUD2Q9BSE4 406 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 KLHL8Q9P2G9 620 aaPredicted RBP18.94■□□□□ 0.62
VPS33A-205ENST00000541169 NCDNQ9UBB6 729 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 PHTF1Q9UMS5 762 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 SNX12Q9UMY4 172 aa18.94■□□□□ 0.62
VPS33A-205ENST00000541169 CTAGE9A4FU28 777 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms