RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TKTL2Q9H0I9 626 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 DUS2Q9NX74 493 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 OR12D3Q9UGF7 316 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 RSL24D1Q9UHA3 163 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 EVLQ9UI08 416 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 DOLKQ9UPQ8 538 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF711Q9Y462 761 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 A0A0G2JMZ2 1700 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 LRRC37A2A6NM11 1700 aa10.46□□□□□ -0.74
CDC42SE1-207ENST00000540998 WDR90Q96KV7 1748 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MYBPHLA2RUH7 354 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 HTRA2O43464 458 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 GJB3O75712 270 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 PENKP01210 267 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 HNRNPCP07910 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CD247P20963 164 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 OXTRP30559 389 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NOS2P35228 1153 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 PGFP49763 221 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NAB1Q13506 487 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC12A1Q13621 1099 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 LPIN1Q14693 890 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 PTPRCAPQ14761 206 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 C16orf72Q14CZ0 275 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 KCTD21Q4G0X4 260 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZFP1Q6P2D0 407 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZBTB49Q6ZSB9 765 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZDHHC17Q8IUH5 632 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 SPPL2CQ8IUH8 684 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CBR4Q8N4T8 237 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CPSF7Q8N684 471 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NUDT8Q8WV74 236 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 KCNA7Q96RP8 456 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 A0A1B0GTL3 188 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 PSMD12O00232 456 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MRASO14807 208 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 DAB1O75553 588 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 SLC4A1P02730 911 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MTHFD1P11586 935 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 STMN1P16949 149 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NPR3P17342 541 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 LRPAP1P30533 357 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CCR3P51677 355 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 RAB10P61026 200 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAXP61244 160 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 LRP8Q14114 963 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MAMDC4Q6UXC1 1216 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 RNF34Q969K3 372 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 ASB9Q96DX5 294 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 IL22Q9GZX6 179 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 SMOXQ9NWM0 555 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF487B1APH4 448 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NR5A2O00482 541 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 MSI1O43347 362 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 B4GAT1O43505 415 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 STRNO43815 780 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 TADA2AO75478 443 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 SIX3O95343 332 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 H6PDO95479 791 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NCK1P16333 377 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 FUT4P22083 530 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 FOXA1P55317 472 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 VPS26BQ4G0F5 336 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 XKR5Q6UX68 686 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CARM1Q86X55 608 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 EPHX4Q8IUS5 362 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 DUSP16Q9BY84 665 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 NFKBIZQ9BYH8 718 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CRTAC1Q9NQ79 661 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
CDC42SE1-207ENST00000540998 HEATR9A2RTY3 570 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 UBDO15205 165 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ALDOCP09972 364 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CCDC166P0CW27 439 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 BDNFP23560 247 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 LILRA4P59901 499 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ECT2LQ008S8 904 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 PRKCQQ04759 706 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 DCTN2Q13561 401 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 BTBD8Q5XKL5 378 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 TAPT1Q6NXT6 567 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CUZD1Q86UP6 607 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 PELI3Q8N2H9 469 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 RMND5BQ96G75 393 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 TEKT5Q96M29 485 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 PAAF1Q9BRP4 392 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ALG9Q9H6U8 611 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZFC3H1O60293 1989 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 DNAJC25-GNG10A0A024R161 153 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 A8MT66 165 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 H3BNH8 94 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 DLGAP1O14490 977 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 HUS1O60921 280 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ATP6V1G1O75348 118 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 MOCS2O96007 188 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 CDH17Q12864 832 aa10.44□□□□□ -0.74
CDC42SE1-207ENST00000540998 ZNF484Q5JVG2 852 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms