RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 C9JVG2 144 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 CASP2P42575 452 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 MAPK11Q15759 364 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 IGFN1Q86VF2 1251 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 CHST12Q9NRB3 414 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.33
SFSWAP-209ENST00000540469 LACTBL1A8MY62 500 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ANGPT2O15123 496 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 BMP2P12643 396 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ADORA2BP29275 332 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 PPP1R26Q5T8A7 1209 aaPredicted RBP12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 PHF21BQ96EK2 531 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ELMO2Q96JJ3 720 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 DGCR6LQ9BY27 220 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 IFT80Q9P2H3 777 aaPredicted RBP12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ZNF229Q9UJW7 825 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ATP11BQ9Y2G3 1177 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.34
SFSWAP-209ENST00000540469 A8MU76 341 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 B4GALT4O60513 344 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CLPXO76031 633 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CAPNS1P04632 268 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 GJB1P08034 283 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 TSPAN8P19075 237 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 FAM83EQ2M2I3 478 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 KDM1BQ8NB78 822 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 SEPHS2Q99611 448 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 PALMDQ9NP74 551 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 EIF2B3Q9NR50 452 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 SMPD3Q9NY59 655 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 STMN1P16949 149 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CYP3A5P20815 502 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CAPGP40121 348 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CBLBQ13191 982 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 LRP8Q14114 963 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CAPRIN1Q14444 709 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 LCLAT1Q6UWP7 414 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CLEC14AQ86T13 490 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 GLT1D1Q96MS3 346 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CCDC90BQ9GZT6 254 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 ZNF385DQ9H6B1 395 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CYP3A43Q9HB55 503 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 FAM155AB1AL88 458 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 TOR1BO14657 336 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 RCVRNP35243 200 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 SP2Q02086 613 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 CSHL1Q14406 222 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 FAM160B1Q5W0V3 765 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 FRA10AC1Q70Z53 315 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 PSTKQ8IV42 348 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 PACRGLQ8N7B6 248 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 NAT16Q8N8M0 369 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 EXT2Q93063 718 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 MUC3BQ9H195 1237 aa12.95□□□□□ -0.34
SFSWAP-209ENST00000540469 TRIM24O15164 1050 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 B4GAT1O43505 415 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 IL18RAPO95256 599 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 MATN1P21941 496 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 SULT1E1P49888 294 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 CTBP1Q13363 440 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 PGS1Q32NB8 556 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 C6orf10Q5SRN2 563 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 TMTC4Q5T4D3 741 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 OR6B3Q8NGW1 331 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 KCNN1Q92952 543 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 HDAC10Q969S8 669 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 CENPNQ96H22 339 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 OLFM1Q99784 485 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 HERC2P3Q9BVR0 1158 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 EML4Q9HC35 981 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 HMG20AQ9NP66 347 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 VPS51Q9UID3 782 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 VWA5AO00534 786 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 DPYSL4O14531 572 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 SULT1C4O75897 302 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 RPS9P46781 194 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 EXOC8Q8IYI6 725 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 DHRS1Q96LJ7 313 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 TRIM8Q9BZR9 551 aa12.94□□□□□ -0.34
SFSWAP-209ENST00000540469 TMEM9Q9P0T7 183 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms