RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ALG6Q9Y672 507 aa13.55□□□□□ -0.24
CCDC130-202ENST00000540216 PLXNA2O75051 1894 aa13.55□□□□□ -0.24
CCDC130-202ENST00000540216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 A0A1W2PR77 199 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 NEMP1O14524 444 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 AREL1O15033 823 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 INSIG1O15503 277 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 GJB3O75712 270 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 PIGNO95427 931 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 XPAP23025 273 aaPredicted RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MAT2AP31153 395 aaKnown RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 AKT2P31751 481 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 ABL2P42684 1182 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 CTSKP43235 329 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MMP13P45452 471 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 RGRP47804 291 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 ELP6Q0PNE2 266 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 HNRNPDQ14103 355 aaKnown RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 UAP1L1Q3KQV9 507 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 CFAP58Q5T655 872 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MARC1Q5VT66 337 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 DAAM2Q86T65 1068 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 KIAA1328Q86T90 577 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 TMEM145Q8NBT3 493 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 FAM174AQ8TBP5 190 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MGME1Q9BQP7 344 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 MAK16Q9BXY0 300 aaKnown RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 SUV39H2Q9H5I1 410 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 GAREM1Q9H706 876 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 AMACRQ9UHK6 382 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
CCDC130-202ENST00000540216 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
CCDC130-202ENST00000540216 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 RCCD1A6NED2 376 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 APOL1O14791 398 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 MATN3O15232 486 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 PJA2O43164 708 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 CR2P20023 1033 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 HNRNPA2B1P22626 353 aaKnown RBP13.53□□□□□ -0.24
CCDC130-202ENST00000540216 CCNCP24863 283 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 SCNN1BP51168 640 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 FOXK2Q01167 660 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 GBE1Q04446 702 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 BCL2L1Q07817 233 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 STAT4Q14765 748 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 HLA-BQ31612 363 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 KATNAL2Q8IYT4 538 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 TEX26Q8N6G2 289 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 PLD5Q8N7P1 536 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 MAML1Q92585 1016 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 HDAC11Q96DB2 347 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 NUDCD1Q96RS6 583 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 C1QTNF2Q9BXJ5 285 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 DTLQ9NZJ0 730 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 TFR2Q9UP52 801 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 ZFR2Q9UPR6 939 aaKnown RBP13.53□□□□□ -0.24
CCDC130-202ENST00000540216 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 PCDHGB2Q9Y5G2 931 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 LAMA1P25391 3075 aa13.53□□□□□ -0.24
CCDC130-202ENST00000540216 ASCC3Q8N3C0 2202 aaKnown RBP13.53□□□□□ -0.24
CCDC130-202ENST00000540216 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
CCDC130-202ENST00000540216 TLR4O00206 839 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 MUSKO15146 869 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SLC31A1O15431 190 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 YKT6O15498 198 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SPINT1O43278 529 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SOCS5O75159 536 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 WNT1P04628 370 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 TNNT1P13805 278 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 TIMP2P16035 220 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 PRLRP16471 622 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 CES1P23141 567 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 CDKN2BP42772 138 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 CCT8P50990 548 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 NAP1L1P55209 391 aaKnown RBP13.52□□□□□ -0.25
CCDC130-202ENST00000540216 POLR2LP62875 67 aaKnown RBP13.52□□□□□ -0.25
CCDC130-202ENST00000540216 KIF5AQ12840 1032 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 SGCGQ13326 291 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 TFDP2Q14188 446 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 TAZQ16635 292 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 UGP2Q16851 508 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 ERAP2Q6P179 960 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 LAYNQ6UX15 382 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 BZW1Q7L1Q6 419 aaKnown RBP13.52□□□□□ -0.25
CCDC130-202ENST00000540216 CAMK1DQ8IU85 385 aa13.52□□□□□ -0.25
CCDC130-202ENST00000540216 OXR1Q8N573 874 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms