RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ACKR2O00590 384 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 KRT38O76015 456 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 CLDN14O95500 239 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 CTPS1P17812 591 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 KCNA5P22460 613 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 LIFRP42702 1097 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 CCDC105Q8IYK2 499 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 CTCFLQ8NI51 663 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-209ENST00000539197 CSGALNACT1Q8TDX6 532 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 NOX4Q9NPH5 578 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 SLC9A2Q9UBY0 812 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 SNX9Q9Y5X1 595 aa5.19□□□□□ -1.58
CCDC7-209ENST00000539197 ERI2A8K979 691 aaKnown RBP5.18□□□□□ -1.58
CCDC7-209ENST00000539197 P2RY10O00398 339 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 METTL18O95568 372 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 GJC1P36383 396 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 PIGAP37287 484 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 CLCN3P51790 818 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 NAPEPLDQ6IQ20 393 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 PGBD2Q6P3X8 592 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 DENND6AQ8IWF6 608 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 LINS1Q8NG48 757 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 NCSTNQ92542 709 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 C1QTNF5Q9BXJ0 243 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 KRTAP4-4Q9BYR3 166 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 ARNT2Q9HBZ2 717 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 NLRC4Q9NPP4 1024 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 ZNF711Q9Y462 761 aa5.18□□□□□ -1.58
CCDC7-209ENST00000539197 E7EVH7 732 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 SEPT4O43236 478 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 SKAP2O75563 359 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-209ENST00000539197 ATP1A1P05023 1023 aaKnown RBP5.17□□□□□ -1.58
CCDC7-209ENST00000539197 PNPLA4P41247 253 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 PRKAA2P54646 552 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 THOC5Q13769 683 aaKnown RBP5.17□□□□□ -1.58
CCDC7-209ENST00000539197 C14orf177Q52M58 125 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 PLEKHA7Q6IQ23 1121 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 WDSUB1Q8N9V3 476 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 ZMIZ2Q8NF64 920 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 USP13Q92995 863 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-209ENST00000539197 RNF183Q96D59 192 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 PTPRHQ9HD43 1115 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 KCNS2Q9ULS6 477 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 CLDN16Q9Y5I7 305 aa5.17□□□□□ -1.58
CCDC7-209ENST00000539197 SNED1Q8TER0 1413 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 CPED1A4D0V7 1026 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 FGF17O60258 216 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 HBP1O60381 514 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 APOHP02749 345 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-209ENST00000539197 SERPINB3P29508 390 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 TTKP33981 857 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 ERVK11-1P61568 191 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 TNFAIP1Q13829 316 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 PUM3Q15397 648 aaKnown RBP5.16□□□□□ -1.58
CCDC7-209ENST00000539197 ZNF484Q5JVG2 852 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 SATL1Q86VE3 508 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 SFR1Q86XK3 245 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 WDR12Q9GZL7 423 aaKnown RBP5.16□□□□□ -1.58
CCDC7-209ENST00000539197 ZNF224Q9NZL3 707 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 TCF19Q9Y242 345 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 VDAC3Q9Y277 283 aa5.16□□□□□ -1.58
CCDC7-209ENST00000539197 HMX3A6NHT5 357 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 FAM72CH0Y354 149 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ADAP00813 363 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 KRT18P05783 430 aaKnown RBP5.15□□□□□ -1.59
CCDC7-209ENST00000539197 LINC00271P0C7V0 271 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 CENPAP49450 140 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 FUT6P51993 359 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ATP12AP54707 1039 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ARSFP54793 590 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 FAM72AQ5TYM5 149 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 FAM72DQ6L9T8 149 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 FAM72BQ86X60 149 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 KTI12Q96EK9 354 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-209ENST00000539197 C3orf30Q96M34 536 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ELAC2Q9BQ52 826 aaKnown RBP5.15□□□□□ -1.59
CCDC7-209ENST00000539197 TAF1DQ9H5J8 278 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ZFP57Q9NU63 452 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ANKRD10Q9NXR5 420 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 DACT1Q9NYF0 836 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 SLCO3A1Q9UIG8 710 aa5.15□□□□□ -1.59
CCDC7-209ENST00000539197 ZNF587BE7ETH6 402 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 HSPA12AO43301 675 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 EDIL3O43854 480 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 CAND2O75155 1236 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SLC22A3O75751 556 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SERPINC1P01008 464 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 CETPP11597 493 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 CDKN1AP38936 164 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 RBM5P52756 815 aaKnown RBP eCLIP5.14□□□□□ -1.59
CCDC7-209ENST00000539197 ZNF155Q12901 538 aaPredicted RBP5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SMAD1Q15797 465 aaKnown RBP5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SYT16Q17RD7 645 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 PAPPA-AS1Q5QFB9 102 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SHFQ7M4L6 423 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 EPHX4Q8IUS5 362 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 SFTPA2Q8IWL1 248 aa5.14□□□□□ -1.59
CCDC7-209ENST00000539197 GHDCQ8N2G8 530 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms