RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SLC1A2P43004 574 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 MPP1Q00013 466 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 SETDB1Q15047 1291 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 GALNTL6Q49A17 601 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 CLEC14AQ86T13 490 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 HS6ST3Q8IZP7 471 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 CARNMT1Q8N4J0 409 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 FITM2Q8N6M3 262 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 PPM1EQ8WY54 764 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 LRRC3Q9BY71 257 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 TMEM216Q9P0N5 145 aa20.58■□□□□ 0.89
DDX55-205ENST00000538744 CXXC1Q9P0U4 656 aaPredicted RBP20.58■□□□□ 0.89
DDX55-205ENST00000538744 NDST3O95803 873 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 GSRP00390 522 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 PRKCGP05129 697 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 CKMP06732 381 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 CD151P48509 253 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 CSRP3P50461 194 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 STX3Q13277 289 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 USP10Q14694 798 aaKnown RBP20.58■□□□□ 0.88
DDX55-205ENST00000538744 DLG2Q15700 870 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 TMEM240Q5SV17 173 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 PSRC1Q6PGN9 363 aaPredicted RBP20.58■□□□□ 0.88
DDX55-205ENST00000538744 FAM217AQ8IXS0 508 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 MAB21L3Q8N8X9 362 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 ACVR1CQ8NER5 493 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 PPP1R14CQ8TAE6 165 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.88
DDX55-205ENST00000538744 TMA16Q96EY4 203 aaKnown RBP20.58■□□□□ 0.88
DDX55-205ENST00000538744 GCNAQ96QF7 691 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 RAD9AQ99638 391 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 TCF25Q9BQ70 676 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 TLK1Q9UKI8 766 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 FBXO5Q9UKT4 447 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 LZTS1Q9Y250 596 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 CAPN7Q9Y6W3 813 aa20.58■□□□□ 0.88
DDX55-205ENST00000538744 E2F8A0AVK6 867 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 GFRA2O00451 464 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 SCAMP3O14828 347 aaKnown RBP20.57■□□□□ 0.88
DDX55-205ENST00000538744 SLC7A4O43246 635 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 LUC7L3O95232 432 aaKnown RBP20.57■□□□□ 0.88
DDX55-205ENST00000538744 CDC25CP30307 473 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 SLC7A9P82251 487 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 ZXDBP98169 803 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 PCLAFQ15004 111 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 CYTH1Q15438 398 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 TAF1BQ53T94 588 aaPredicted RBP20.57■□□□□ 0.88
DDX55-205ENST00000538744 RAPH1Q70E73 1250 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 MICALL1Q8N3F8 863 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 OR13J1Q8NGT2 312 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 RFWD2Q8NHY2 731 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 NOD2Q9HC29 1040 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 SCUBE2Q9NQ36 999 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 DCTN4Q9UJW0 460 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 ZNF510Q9Y2H8 683 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 IRAK3Q9Y616 596 aa20.57■□□□□ 0.88
DDX55-205ENST00000538744 MTCL1Q9Y4B5 1905 aaKnown RBP20.57■□□□□ 0.88
DDX55-205ENST00000538744 TRAV19A0A0A6YYK7 116 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 FAM95CA0A1B0GW59 222 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 INSIG1O15503 277 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 LDB2O43679 373 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 SNNO75324 88 aaPredicted RBP20.56■□□□□ 0.88
DDX55-205ENST00000538744 GLUD1P00367 558 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 CR2P20023 1033 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 RGRP47804 291 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 OCRLQ01968 901 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 GALNT3Q14435 633 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 MBLAC2Q68D91 279 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 CCDC91Q7Z6B0 441 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 LCA5Q86VQ0 697 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 PLD6Q8N2A8 252 aaKnown RBP20.56■□□□□ 0.88
DDX55-205ENST00000538744 PEX13Q92968 403 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 TSNARE1Q96NA8 513 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 LRRC37BQ96QE4 947 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 TRIB3Q96RU7 358 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 ZNF358Q9NW07 568 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 COPG2Q9UBF2 871 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 HELZP42694 1942 aaKnown RBP20.56■□□□□ 0.88
DDX55-205ENST00000538744 DNAJB1P25685 340 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 CTNNB1P35222 781 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 GMPRP36959 345 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 SCNN1BP51168 640 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 ARF5P84085 180 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 IRF9Q00978 393 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 CES4AQ5XG92 561 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 SLC41A1Q8IVJ1 513 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 NUDCD1Q96RS6 583 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 MFSD1Q9H3U5 465 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.56■□□□□ 0.88
DDX55-205ENST00000538744 CHKBQ9Y259 395 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 SH3BP1Q9Y3L3 701 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 ARIH1Q9Y4X5 557 aaPredicted RBP20.56■□□□□ 0.88
DDX55-205ENST00000538744 SLC4A7Q9Y6M7 1214 aa20.56■□□□□ 0.88
DDX55-205ENST00000538744 H0YHG0 523 aa20.55■□□□□ 0.88
DDX55-205ENST00000538744 DNAJC8O75937 253 aaPredicted RBP20.55■□□□□ 0.88
DDX55-205ENST00000538744 APOA4P06727 396 aa20.55■□□□□ 0.88
DDX55-205ENST00000538744 FGF3P11487 239 aaPredicted RBP20.55■□□□□ 0.88
DDX55-205ENST00000538744 MYL4P12829 197 aa20.55■□□□□ 0.88
DDX55-205ENST00000538744 CPA3P15088 417 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms