RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 SLC38A8A6NNN8 435 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 NT5C1B-RDH14C9J2C7 533 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 F8W8V4 182 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 MATN2O00339 956 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 KIF3CO14782 793 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC7A4O43246 635 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 DLX3O60479 287 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 PRAMEF11O60813 436 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 TACR2P21452 398 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 GLRBP48167 497 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 BTG3Q14201 252 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF460Q14592 562 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 ARL13AQ5H913 290 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 CFAP157Q5JU67 520 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 CNSTQ6PJW8 725 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 NET1Q7Z628 596 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 TMEM173Q86WV6 379 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 CIR1Q86X95 450 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 GPATCH11Q8N954 259 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 OR13J1Q8NGT2 312 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 MAPK15Q8TD08 544 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 PDCD6IPQ8WUM4 868 aaKnown RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 CEP295NLQ96MC4 621 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 XPR1Q9UBH6 696 aa11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.52□□□□□ -0.57
SLC28A1-204ENST00000538177 H0Y3Z8 333 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 AURKAO14965 403 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PSMG1O95456 288 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 CHRNGP07510 517 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ATXN1LP0C7T5 689 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ATF6P18850 670 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 GLDCP23378 1020 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PRDX6P30041 224 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 OR1E1P30953 314 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ACVRL1P37023 503 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 RPL14P50914 215 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 CLCN5P51795 746 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 NAGLUP54802 743 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ASPHQ12797 758 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC14A2Q15849 920 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC9B1Q4ZJI4 515 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 SIRPB2Q5JXA9 342 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF354CQ86Y25 554 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ULK2Q8IYT8 1036 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 KCNV2Q8TDN2 545 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 GIPC2Q8TF65 315 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 BCL7CQ8WUZ0 217 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 FAM161BQ96MY7 647 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 CDK5RAP1Q96SZ6 601 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 MRPL57Q9BQC6 102 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 THTPAQ9BU02 230 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 RETREG1Q9H6L5 497 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 UXTQ9UBK9 157 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TBKBP1A7MCY6 615 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 SLCO1B7G3V0H7 640 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 HDAC3O15379 428 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PIGNO95427 931 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 EPOP01588 193 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TFEBP19484 476 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 NCF2P19878 526 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 MPSTP25325 297 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 MAP2K2P36507 400 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 KCNQ1P51787 676 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 COPAP53621 1224 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 SLC12A2P55011 1212 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 NAA25Q14CX7 972 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TRMT5Q32P41 509 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 RBM20Q5T481 1227 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PRSS55Q6UWB4 352 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 LMNTD2Q8IXW0 634 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 LSMEM2Q8N112 164 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 HEXDCQ8WVB3 486 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 ZNF599Q96NL3 588 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 IGSF5Q9NSI5 407 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 STOML1Q9UBI4 398 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 VTI1BQ9UEU0 232 aa11.51□□□□□ -0.57
SLC28A1-204ENST00000538177 TTC24A2A3L6 582 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 F5H5T6 163 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 GRID2O43424 1007 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 LDB2O43679 373 aa11.5□□□□□ -0.57
SLC28A1-204ENST00000538177 ZBTB14O43829 449 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms