RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PGBD2Q6P3X8 592 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 SATL1Q86VE3 508 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 DENND6AQ8IWF6 608 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 OR1F2PQ96R84 312 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 C1QTNF5Q9BXJ0 243 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 WDR12Q9GZL7 423 aaKnown RBP5.16□□□□□ -1.58
CCDC7-208ENST00000537047 EBF2Q9HAK2 575 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 TMLHEQ9NVH6 421 aa5.16□□□□□ -1.58
CCDC7-208ENST00000537047 SNED1Q8TER0 1413 aa5.15□□□□□ -1.58
CCDC7-208ENST00000537047 HMX3A6NHT5 357 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 P2RY10O00398 339 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 ADAP00813 363 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 APOHP02749 345 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-208ENST00000537047 KRT18P05783 430 aaKnown RBP5.15□□□□□ -1.59
CCDC7-208ENST00000537047 LINC00271P0C7V0 271 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 FUT6P51993 359 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 ARSFP54793 590 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 PHEXP78562 749 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 KTI12Q96EK9 354 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-208ENST00000537047 C3orf30Q96M34 536 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 LRFN5Q96NI6 719 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 ELAC2Q9BQ52 826 aaKnown RBP5.15□□□□□ -1.59
CCDC7-208ENST00000537047 TAF1DQ9H5J8 278 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-208ENST00000537047 ZFP57Q9NU63 452 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 DACT1Q9NYF0 836 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 PAM16Q9Y3D7 125 aa5.15□□□□□ -1.59
CCDC7-208ENST00000537047 ZNF587BE7ETH6 402 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 HSPA12AO43301 675 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 CAND2O75155 1236 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 SERPINC1P01008 464 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 DHRS4L1P0CG22 281 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 TAF6P49848 677 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 RBM5P52756 815 aaKnown RBP eCLIP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 ZNF155Q12901 538 aaPredicted RBP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 SMAD1Q15797 465 aaKnown RBP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 PLEKHO1Q53GL0 409 aaPredicted RBP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 PAPPA-AS1Q5QFB9 102 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 KLHL24Q6TFL4 600 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 TRMT1LQ7Z2T5 733 aaKnown RBP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 EPHX4Q8IUS5 362 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 SPATA22Q8NHS9 363 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 NCSTNQ92542 709 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 USP13Q92995 863 aaPredicted RBP5.14□□□□□ -1.59
CCDC7-208ENST00000537047 RNF183Q96D59 192 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 FEM1CQ96JP0 617 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 RMDN3Q96TC7 470 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 SMARCAL1Q9NZC9 954 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 CLDN16Q9Y5I7 305 aa5.14□□□□□ -1.59
CCDC7-208ENST00000537047 ERI2A8K979 691 aaKnown RBP5.13□□□□□ -1.59
CCDC7-208ENST00000537047 PPM1GO15355 546 aaPredicted RBP5.13□□□□□ -1.59
CCDC7-208ENST00000537047 SLC22A3O75751 556 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 AMBPP02760 352 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 MYL1P05976 194 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 TFPIP10646 304 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 FGF5P12034 268 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 CENPAP49450 140 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 TNFAIP2Q03169 654 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 TROAPQ12815 778 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 DCAF6Q58WW2 860 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 SHFQ7M4L6 423 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 GHDCQ8N2G8 530 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 CTCFLQ8NI51 663 aaPredicted RBP5.13□□□□□ -1.59
CCDC7-208ENST00000537047 CREB3L4Q8TEY5 395 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 GOLGA1Q92805 767 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 RNFT2Q96EX2 444 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 ZNF224Q9NZL3 707 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 SLCO3A1Q9UIG8 710 aa5.13□□□□□ -1.59
CCDC7-208ENST00000537047 ANTXRLA6NF34 631 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 HBP1O60381 514 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 RGS11O94810 467 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 GM2AP17900 193 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 MARK3P27448 753 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 GJB7Q6PEY0 223 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 SLC9B2Q86UD5 537 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 TANKQ92844 425 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 RBM17Q96I25 401 aaKnown RBP5.12□□□□□ -1.59
CCDC7-208ENST00000537047 CRB3Q9BUF7 120 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 GFRA4Q9GZZ7 299 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 G6PC2Q9NQR9 355 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 ANKRD10Q9NXR5 420 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
CCDC7-208ENST00000537047 A0A0G2JPF8 293 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 HNRNPCL3B7ZW38 293 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 HNRNPCL1O60812 293 aaKnown RBP5.11□□□□□ -1.59
CCDC7-208ENST00000537047 HNRNPCL4P0DMR1 293 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 ANOS1P23352 680 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 LIFRP42702 1097 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 ATP12AP54707 1039 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
CCDC7-208ENST00000537047 EFNB3Q15768 340 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 PLA2G4FQ68DD2 849 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 RINLQ6ZS11 566 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 NEK10Q6ZWH5 1172 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 ZC3HC1Q86WB0 502 aaKnown RBP5.11□□□□□ -1.59
CCDC7-208ENST00000537047 LURAP1LQ8IV03 231 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 FIG4Q92562 907 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 ERGIC1Q969X5 290 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 FBXO17Q96EF6 278 aa5.11□□□□□ -1.59
CCDC7-208ENST00000537047 EGLN1Q9GZT9 426 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms