RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SYCP1Q15431 976 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 ISXQ2M1V0 245 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 PRRT3Q5FWE3 981 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 MON1BQ7L1V2 547 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 GPR155Q7Z3F1 870 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 SLFN11Q7Z7L1 901 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 PHF13Q86YI8 300 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 PHACTR4Q8IZ21 702 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 TP53I13Q8NBR0 393 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 ZNF248Q8NDW4 579 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 ARHGEF26Q96DR7 871 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 EXOC2Q96KP1 924 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 ZNF578Q96N58 590 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 IL12RB2Q99665 862 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 WRAP53Q9BUR4 548 aaKnown RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 LRRC61Q9BV99 259 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 TTYH3Q9C0H2 523 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 POLR1BQ9H9Y6 1135 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 SEPT11Q9NVA2 429 aaKnown RBP17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 FANCLQ9NW38 375 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 KIF26BQ2KJY2 2108 aa17.3■□□□□ 0.36
RPUSD4-207ENST00000532800 TCRBV5S1A1TA0A578 114 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 EME2A4GXA9 379 aaPredicted RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 ZSCAN5CA6NGD5 496 aaPredicted RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 CREB3O43889 395 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 LZTS3O60299 673 aaPredicted RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 TM7SF2O76062 418 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 DXOO77932 396 aaKnown RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 PIGNO95427 931 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 IGSF6O95976 241 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 TPM2P07951 284 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 TIMP2P16035 220 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 LSSP48449 732 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 RHOAP61586 193 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 NR0B2Q15466 257 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 C3orf38Q5JPI3 329 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 EFHC2Q5JST6 749 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 PERM1Q5SV97 790 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 SLC35F3Q8IY50 421 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 CXorf40AQ8TE69 158 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 EPAS1Q99814 870 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 BOCQ9BWV1 1114 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 ASCL3Q9NQ33 180 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 SPASTQ9UBP0 616 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 LHX3Q9UBR4 397 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 SALL4Q9UJQ4 1053 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 SATB2Q9UPW6 733 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 COQ6Q9Y2Z9 468 aa17.29■□□□□ 0.36
RPUSD4-207ENST00000532800 LRP4O75096 1905 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 PMS2P1A4D2B8 440 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 RASA4BC9J798 803 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 TPP1O14773 563 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 MUSKO15146 869 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 RASA4O43374 803 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 CALB1P05937 261 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 CELA2BP08218 269 aaPredicted RBP17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 ADKP55263 362 aaKnown RBP17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 RPL7AP62424 266 aaKnown RBP17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 IRF4Q15306 451 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 DNAJC24Q6P3W2 148 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 PCSK4Q6UW60 755 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 BTN2A2Q8WVV5 523 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 ATXN7L3BQ96GX2 97 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 PCMTD1Q96MG8 357 aaPredicted RBP17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 MCEEQ96PE7 176 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 CLPBQ9H078 707 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 FZD10Q9ULW2 581 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 MFHAS1Q9Y4C4 1052 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 DAAM1Q9Y4D1 1078 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 ENTPD2Q9Y5L3 495 aa17.28■□□□□ 0.36
RPUSD4-207ENST00000532800 TEX51A0A1B0GUA7 166 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 LGALS16A8MUM7 142 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 TK2O00142 265 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 EIF4A3P38919 411 aaKnown RBP17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 ZNF143P52747 638 aaPredicted RBP17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 RAD51Q06609 339 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 SERINC3Q13530 473 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 CYTH1Q15438 398 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 TCEA2Q15560 299 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 INO80DQ53TQ3 878 aaPredicted RBP17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 C6orf132Q5T0Z8 1188 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 FAXCQ5TGI0 409 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 LSMEM2Q8N112 164 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 NEK11Q8NG66 645 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 CASKIN2Q8WXE0 1202 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 CPNE5Q9HCH3 593 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 NCKIPSDQ9NZQ3 722 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 DKK3Q9UBP4 350 aa17.27■□□□□ 0.36
RPUSD4-207ENST00000532800 ANKRD36A6QL64 1941 aa17.27■□□□□ 0.35
RPUSD4-207ENST00000532800 HELZ2Q9BYK8 2649 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms