RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PRKD1Q15139 912 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF699Q32M78 642 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 KLHL12Q53G59 568 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 NIPA1Q7RTP0 329 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 BNIPLQ7Z465 357 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM126BQ8IUX1 230 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM192Q8IY95 271 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 C12orf50Q8NA57 414 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 MCFD2Q8NI22 146 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC35C1Q96A29 364 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 FAR2Q96K12 515 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DMRTB1Q96MA1 342 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 AIFM2Q9BRQ8 373 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 UQCC2Q9BRT2 126 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM121Q9BTD3 319 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 NOL11Q9H8H0 719 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 MAGEE1Q9HCI5 957 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ACP6Q9NPH0 428 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PRMT7Q9NVM4 692 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 QPCTLQ9NXS2 382 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 GMIPQ9P107 970 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DCDC2Q9UHG0 476 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 HEMK1Q9Y5R4 338 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 MYH6P13533 1939 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 KRT87PA6NCN2 255 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 H3BNH8 94 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 B4GALT4O60513 344 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 RECQL4O94761 1208 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 APRTP07741 180 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ZSCAN5DPP0CG00 497 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 CYBAP13498 195 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 CPB1P15086 417 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 RCVRNP35243 200 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 GATMP50440 423 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 RUNX1T1Q06455 604 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SPIRE1Q08AE8 756 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM119Q4V9L6 283 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 OTUD3Q5T2D3 398 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ACAD10Q6JQN1 1059 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SCYL2Q6P3W7 929 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 VASH1Q7L8A9 365 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 POLNQ7Z5Q5 900 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DCP2Q8IU60 420 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 FAM20CQ8IXL6 584 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PNPT1Q8TCS8 783 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DNAJC19Q96DA6 116 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 NUAK2Q9H093 628 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SIAEQ9HAT2 523 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 FANCEQ9HB96 536 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF304Q9HCX3 659 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF701M0R085 212 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 AURKAO14965 403 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 AP1G1O43747 822 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 KCNH1O95259 989 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 LDLRP01130 860 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 IFNA16P05015 189 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DBTP11182 482 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 AOC1P19801 751 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PSMA2P25787 234 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RBL1P28749 1068 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 NR4A2P43354 598 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MYBPC1Q00872 1141 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MMRN1Q13201 1228 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF667Q5HYK9 610 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SAMD4BQ5PRF9 694 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 N4BP2L1Q5TBK1 243 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DCAF12L1Q5VU92 463 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SLFN12LQ6IEE8 588 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PPP4R4Q6NUP7 873 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PRR23BQ6ZRT6 265 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ANKS1BQ7Z6G8 1248 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 AMER2Q8N7J2 671 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 BANPQ8N9N5 519 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RP9Q8TA86 221 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MAGEE2Q8TD90 523 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SEPT8Q92599 483 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RCN3Q96D15 328 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MAELQ96JY0 434 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 C16orf70Q9BSU1 422 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 RNF39Q9H2S5 420 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CRNNQ9UBG3 495 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DNPEPQ9ULA0 475 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 A0A088AWK7 358 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 A8MU76 341 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 GPR182O15218 404 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 DYRK3O43781 588 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SGPL1O95470 568 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 UGT2B4P06133 528 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SOX6P35712 828 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ALDH7A1P49419 539 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC26A2P50443 739 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 ARHGDIAP52565 204 aa6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 MRPS6P82932 125 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-209ENST00000532540 CCNIQ14094 377 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms