RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 HNRNPCL1O60812 293 aaKnown RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 CD63P08962 238 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 HOXB5P09067 269 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PRR35P0CG20 571 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 SLC2A4P14672 509 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PTPN2P17706 415 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CTPS1P17812 591 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 TFEBP19484 476 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 ITGAXP20702 1163 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 GPD1P21695 349 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 GABRB2P47870 512 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CENPAP49450 140 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CXCR3P49682 368 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CLCNKBP51801 687 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CFHR1Q03591 330 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 ALDH1L2Q3SY69 923 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CERKLQ49MI3 558 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 C1QTNF12Q5T7M4 302 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PRAMEF17Q5VTA0 474 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 LRCH2Q5VUJ6 765 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 TMEM268Q5VZI3 342 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 LRRC8EQ6NSJ5 796 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PCSK4Q6UW60 755 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 QSOX2Q6ZRP7 698 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 DENND5BQ6ZUT9 1274 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 LDLRAD3Q86YD5 345 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 DDIASQ8IXT1 998 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 KIAA2013Q8IYS2 634 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 C8orf58Q8NAV2 365 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 GPR150Q8NGU9 434 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 OSR1Q8TAX0 266 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 UBE2Q2Q8WVN8 375 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 POMGNT1Q8WZA1 660 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 ATOH1Q92858 354 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 ZMAT2Q96NC0 199 aaKnown RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 MAK16Q9BXY0 300 aaKnown RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 SMARCAD1Q9H4L7 1026 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PDZD7Q9H5P4 517 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 SH2D4AQ9H788 454 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 KIF9Q9HAQ2 790 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 SH3GLB2Q9NR46 395 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 ASAH2Q9NR71 780 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 RRP7BPQ9NSQ0 103 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 WSB2Q9NYS7 404 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 PLEKHB1Q9UF11 243 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 HAO1Q9UJM8 370 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 TLK1Q9UKI8 766 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 PACSIN3Q9UKS6 424 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 WNT6Q9Y6F9 365 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 FAM169AQ9Y6X4 670 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 COL11A2P13942 1736 aaPredicted RBP3.12□□□□□ -1.91
CD44-234ENST00000531873 AOX1Q06278 1338 aa3.12□□□□□ -1.91
CD44-234ENST00000531873 CKAP5Q14008 2032 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 EIF3CLB5ME19 914 aaKnown RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 KLRF2D3W0D1 207 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 FOXN1O15353 648 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 KLK8O60259 260 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 TMCC1O94876 653 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CSPG5O95196 566 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 IPO7O95373 1038 aaKnown RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 MT-CYBP00156 380 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 RB1P06400 928 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 IRF1P10914 325 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 UNGP13051 313 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 SELLP14151 372 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SRD5A1P18405 259 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 YWHAQP27348 245 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 MCM7P33993 719 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PTGER1P34995 402 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SLC15A1P46059 708 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 HSD17B4P51659 736 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PPP5CP53041 499 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PMS2P54278 862 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 SLC12A2P55011 1212 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PROK1P58294 105 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PRAMEP78395 509 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 ZBED6P86452 979 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 DPTQ07507 201 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 LRMPQ12912 555 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CDC16Q13042 620 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 OLIG2Q13516 323 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 VEPH1Q14D04 833 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PCLAFQ15004 111 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 PPP2R5BQ15173 497 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 AKNAD1Q5T1N1 836 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 GARNL3Q5VVW2 1013 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 AAGABQ6PD74 315 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CRELD2Q6UXH1 353 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 GLDNQ6ZMI3 551 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 ZNF813Q6ZN06 617 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CFAP77Q6ZQR2 320 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 FAM83HQ6ZRV2 1179 aaPredicted RBP3.11□□□□□ -1.91
CD44-234ENST00000531873 CYB5R4Q7L1T6 521 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 KDELC2Q7Z4H8 507 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 TBC1D26Q86UD7 250 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 POC5Q8NA72 575 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 IL17RCQ8NAC3 791 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 KCTD6Q8NC69 237 aa3.11□□□□□ -1.91
CD44-234ENST00000531873 CMASQ8NFW8 434 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms