RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CCDC15Q0P6D6 951 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 TFDP2Q14188 446 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 GRM3Q14832 879 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 DUOXA1Q1HG43 343 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 AASDHQ4L235 1098 aaPredicted RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 AADACL2Q6P093 401 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 SLC23A3Q6PIS1 610 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 LAYNQ6UX15 382 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 TRIM69Q86WT6 500 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CAMK1DQ8IU85 385 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CCDC13Q8IYE1 715 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 BBS5Q8N3I7 341 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 RNF10Q8N5U6 811 aaKnown RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 TEX26Q8N6G2 289 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CCNYQ8ND76 341 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 C1orf216Q8TAB5 229 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 FATE1Q969F0 183 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 HAUS1Q96CS2 278 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 TSGA13Q96PP4 275 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 TUBGCP5Q96RT8 1024 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 EDEM2Q9BV94 578 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CAPN10Q9HC96 672 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 NT5MQ9NPB1 228 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 SAE1Q9UBE0 346 aaPredicted RBP12.01□□□□□ -0.49
LTBP3-219ENST00000530990 DKK3Q9UBP4 350 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 SUSD2Q9UGT4 822 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 GGT7Q9UJ14 662 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 AMFRQ9UKV5 643 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 FADS3Q9Y5Q0 445 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 CACNA1EQ15878 2313 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 ZNF292O60281 2723 aa12.01□□□□□ -0.49
LTBP3-219ENST00000530990 A0A1B0GTW7 788 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 A0A1W2PPC4 97 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 A0A1W2PQU0 124 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 TSPAN11A1L157 253 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 DDX3YO15523 660 aaKnown RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 HLA-DQB2P05538 268 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SERPINF2P08697 491 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 CCNB1P14635 433 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 GNSP15586 552 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 TGM2P21980 687 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SERPINA4P29622 427 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 FOXK2Q01167 660 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 AP1B1Q10567 949 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 ZBTB17Q13105 803 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 PDK1Q15118 436 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 FAM182AQ5T1J6 154 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SEL1L3Q68CR1 1132 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 BBS12Q6ZW61 710 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 B4GALNT4Q76KP1 1039 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 CEP76Q8TAP6 659 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 ANP32BQ92688 251 aaKnown RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 ZNF641Q96N77 438 aaPredicted RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 SLC6A18Q96N87 628 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 HEMGNQ9BXL5 484 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 NUSAP1Q9BXS6 441 aaKnown RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 KCNF1Q9H3M0 494 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SUV39H2Q9H5I1 410 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 ATP13A3Q9H7F0 1226 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 NOD2Q9HC29 1040 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 TM9SF3Q9HD45 589 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 SLC6A14Q9UN76 642 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 ZFR2Q9UPR6 939 aaKnown RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 TTLL3Q9Y4R7 772 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 DMXL1Q9Y485 3027 aa12□□□□□ -0.49
LTBP3-219ENST00000530990 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
LTBP3-219ENST00000530990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 MIF4GDA9UHW6 222 aaKnown RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 KCNK1O00180 336 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 WNT9AO14904 365 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 AREL1O15033 823 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 AP1G1O43747 822 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 FOXD2O60548 495 aaPredicted RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PCDH8O95206 1070 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PYGMP11217 842 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 TIMP2P16035 220 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PRLRP16471 622 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 ENGP17813 658 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 ITIH2P19823 946 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 PTPN7P35236 360 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 MAPK8P45983 427 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 COPS2P61201 443 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 IFI35P80217 286 aaPredicted RBP11.99□□□□□ -0.49
LTBP3-219ENST00000530990 DSC2Q02487 901 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 BCL2L1Q07817 233 aa11.99□□□□□ -0.49
LTBP3-219ENST00000530990 TRAF2Q12933 501 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms