RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 TSPAN11A1L157 253 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 NEMP1O14524 444 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 INSIG1O15503 277 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 PAK4O96013 591 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 TIMP2P16035 220 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 PRLRP16471 622 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 HSPA9P38646 679 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 GRK6P43250 576 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SSR1P43307 286 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 FAM193AP78312 1265 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SGCGQ13326 291 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SHBQ15464 509 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 BRAT1Q6PJG6 821 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 ARHGAP36Q6ZRI8 547 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 ABI3BPQ7Z7G0 1075 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SPATS2Q86XZ4 545 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 TC2NQ8N9U0 490 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 NETO2Q8NC67 525 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 KCTD6Q8NC69 237 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 TSEN2Q8NCE0 465 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLC35G2Q8TBE7 412 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 KLK6Q92876 244 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 MRFAP1L1Q96HT8 127 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 PSKH2Q96QS6 385 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SPTLC3Q9NUV7 552 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 ETNK2Q9NVF9 386 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 COL5A1P20908 1838 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 LRRK1Q38SD2 2015 aa12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 TDRD6O60522 2096 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-209ENST00000528230 A6NNZ2 444 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 SPINT1O43278 529 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 MAFKO60675 156 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 PEX11BO96011 259 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 ITGAVP06756 1048 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 THEGLP0DJG4 465 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 XPAP23025 273 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 SERPINA4P29622 427 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 TAS2R40P59535 323 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 AP1S1P61966 158 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 ELP6Q0PNE2 266 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 DPYSL3Q14195 570 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 FGL2Q14314 439 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 PAFAH1B3Q15102 231 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 UGP2Q16851 508 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 TMEM52BQ4KMG9 183 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 ATP13A4Q4VNC1 1196 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 PRAMEF14Q5SWL7 426 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 BBS5Q8N3I7 341 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 DENND6BQ8NEG7 585 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 SAP25Q8TEE9 199 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 NSMCE1Q8WV22 266 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 IFT43Q96FT9 208 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 EXOC2Q96KP1 924 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 BMFQ96LC9 184 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF670Q9BS34 389 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 RBSNQ9H1K0 784 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 ATP13A3Q9H7F0 1226 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 WASF3Q9UPY6 502 aa12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-209ENST00000528230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 A0A1W2PQ67 120 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CFAP69A5D8W1 941 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 IGLON5A6NGN9 336 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF487B1APH4 448 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 TOR1BO14657 336 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 FPGTO14772 594 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 TNFSF14O43557 240 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 PIGNO95427 931 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 LCA5LO95447 670 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CD48P09326 243 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 EPHA8P29322 1005 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 RGRP47804 291 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ZNF75DP51815 510 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 POLR2LP62875 67 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 BCL2L1Q07817 233 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 SLC10A7Q0GE19 358 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 FOXC1Q12948 553 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 MMRN1Q13201 1228 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 MESDQ14696 234 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ANKRD20A8PQ5CZ79 823 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 RALGPS1Q5JS13 557 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 GCNT7Q6ZNI0 430 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 Q6ZSR6 202 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 ATPAF2Q8N5M1 289 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 PCDH19Q8TAB3 1148 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 CXorf40AQ8TE69 158 aa12.23□□□□□ -0.45
TRAPPC4-209ENST00000528230 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms