RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 KLC1Q07866 573 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 TBL3Q12788 808 aaKnown RBP17.74■□□□□ 0.43
USH1C-205ENST00000527020 IRGCQ6NXR0 463 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 ADGRG6Q86SQ4 1221 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 HPS6Q86YV9 775 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PNPLA1Q8N8W4 532 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 GPR152Q8TDT2 470 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PYDC1Q8WXC3 89 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 STON2Q8WXE9 905 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 OLFM1Q99784 485 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 MRPL46Q9H2W6 279 aaKnown RBP17.74■□□□□ 0.43
USH1C-205ENST00000527020 TMEM248Q9NWD8 314 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 POMPQ9Y244 141 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PRG3Q9Y2Y8 225 aaPredicted RBP17.74■□□□□ 0.43
USH1C-205ENST00000527020 IGLV3-10A0A075B6K4 115 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 NEBLO76041 1014 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 TBX18O95935 607 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 EOMESO95936 686 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 CKBP12277 381 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
USH1C-205ENST00000527020 CPB1P15086 417 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 CD86P42081 329 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 OR1G1P47890 313 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 POU4F1Q01851 419 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PSMD5Q16401 504 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 PPM1LQ5SGD2 360 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 FBXW8Q8N3Y1 598 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 KDM1BQ8NB78 822 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 OR13J1Q8NGT2 312 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 IGSF8Q969P0 613 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 RANBP9Q96S59 729 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 NDNQ99608 321 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 ZYG11BQ9C0D3 744 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 FBXO44Q9H4M3 255 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 IL37Q9NZH6 218 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 A0A087X1B8 175 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TTC24A2A3L6 582 aaPredicted RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 HEATR9A2RTY3 570 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 BAG2O95816 211 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 ELNP15502 786 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 RENBPP51606 427 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 MTTPP55157 894 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 DSC2Q02487 901 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 EFEMP1Q12805 493 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TMEM198Q66K66 360 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 KIAA0408Q6ZU52 694 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 SLC24A5Q71RS6 500 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 CPSF7Q8N684 471 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 CCDC124Q96CT7 223 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 MRPL57Q9BQC6 102 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 NEMP2A6NFY4 417 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TMEM233B4DJY2 109 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 SKAP2O75563 359 aaPredicted RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 SLC2A3P11169 496 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TM4SF4P48230 202 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 SERPINH1P50454 418 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 FAM189BP81408 668 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 MRPS35P82673 323 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 ZRSR2Q15696 482 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 NFE2Q16621 373 aaPredicted RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 TCHHL1Q5QJ38 904 aaPredicted RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 VARS2Q5ST30 1063 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 PGBD5Q8N414 524 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TEX26Q8N6G2 289 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 ATAD1Q8NBU5 361 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 PDCD6IPQ8WUM4 868 aaKnown RBP17.73■□□□□ 0.43
USH1C-205ENST00000527020 PSMG2Q969U7 264 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 TADA1Q96BN2 335 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 SGF29Q96ES7 293 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 VTI1BQ9UEU0 232 aa17.73■□□□□ 0.43
USH1C-205ENST00000527020 FAM92AA1XBS5 289 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 DPPA5A6NC42 116 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 NPHS1O60500 1241 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 SOAT2O75908 522 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 LEPRP48357 1165 aaKnown RBP17.72■□□□□ 0.43
USH1C-205ENST00000527020 TECRLQ5HYJ1 363 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 MARC1Q5VT66 337 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 SNX32Q86XE0 403 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 CCNYL1Q8N7R7 359 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 PCSK9Q8NBP7 692 aaKnown RBP17.72■□□□□ 0.43
USH1C-205ENST00000527020 CCDC28BQ9BUN5 200 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 G3BP2Q9UN86 482 aaKnown RBP17.72■□□□□ 0.43
USH1C-205ENST00000527020 CHD5Q8TDI0 1954 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 MROH6A6NGR9 719 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 SLCO1B7G3V0H7 640 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 UPP2O95045 317 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 LINGO3P0C6S8 592 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 THRAP10827 490 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 KCNA5P22460 613 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 PAX7P23759 505 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 MAGEA11P43364 429 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 DNAJB13P59910 316 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 CSHL1Q14406 222 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 ARMC3Q5W041 872 aa17.72■□□□□ 0.43
USH1C-205ENST00000527020 CAPRIN2Q6IMN6 1127 aaKnown RBP17.72■□□□□ 0.43
USH1C-205ENST00000527020 FBXL22Q6P050 247 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms