RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MAT2AP31153 395 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 GKP32189 559 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDKN2BP42772 138 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 GRIA4P48058 902 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 EPHB1P54762 984 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 RACK1P63244 317 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCZ1BP86790 482 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCZ1P86791 482 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC10A7Q0GE19 358 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 GSE1Q14687 1217 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 STAT4Q14765 748 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SF3A2Q15428 464 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PLA2G2CQ5R387 149 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PIP5KL1Q5T9C9 394 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARMC12Q5T9G4 340 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SEL1L2Q5TEA6 688 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PEAR1Q5VY43 1037 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 NAPEPLDQ6IQ20 393 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC23A3Q6PIS1 610 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 MFSD7Q6UXD7 560 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 USP45Q70EL2 814 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRIM69Q86WT6 500 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 HORMAD1Q86X24 394 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDKL3Q8IVW4 592 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PQLC3Q8N755 202 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PLD5Q8N7P1 536 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC57Q8N9N7 239 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TTC13Q8NBP0 860 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRIM58Q8NG06 486 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 NETO1Q8TDF5 533 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDCD6IPQ8WUM4 868 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TFB1MQ8WVM0 346 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 DNASE2BQ8WZ79 361 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARRDC3Q96B67 414 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 BIRC7Q96CA5 298 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC45Q96CN5 670 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 FEM1CQ96JP0 617 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SERAC1Q96JX3 654 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 NUDCD1Q96RS6 583 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 MGME1Q9BQP7 344 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 GTPBP2Q9BX10 602 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 OSBPL8Q9BZF1 889 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SUV39H2Q9H5I1 410 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TM9SF3Q9HD45 589 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM9BQ9NQ34 198 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 RBM22Q9NW64 420 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRIM10Q9UDY6 481 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SALL4Q9UJQ4 1053 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 DNPEPQ9ULA0 475 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 EFR3BQ9Y2G0 817 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 ATP8A1Q9Y2Q0 1164 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CACNA1IQ9P0X4 2223 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 LNP1A1A4G5 178 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TSPAN11A1L157 253 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 A6NNZ2 444 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 HACD1B0YJ81 288 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 H7C0C1 242 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 APOC4-APOC2K7ER74 178 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 KCNK1O00180 336 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARHGAP33O14559 1287 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC31A1O15431 190 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 INSIG1O15503 277 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 LATO43561 262 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 KIF5CO60282 957 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 DFNA5O60443 496 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 OPHN1O60890 802 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TM7SF2O76062 418 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 APOC2P02655 101 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 IGHV4-34P06331 123 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ELFN1P0C7U0 828 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CYP2A6P11509 494 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ENGP17813 658 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 HNRNPA2B1P22626 353 aaKnown RBP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CD38P28907 300 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PTPN7P35236 360 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ABL2P42684 1182 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ATP5OP48047 213 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 MARCKSL1P49006 195 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 METAP1P53582 386 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 LIMK1P53667 647 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAXP61244 160 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPP2CBP62714 309 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPP2CAP67775 309 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM193AP78312 1265 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 IFI35P80217 286 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPIDQ08752 370 aaKnown RBP5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 OVGP1Q12889 678 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 XRCC4Q13426 336 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARHGEF7Q14155 803 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 LLGL1Q15334 1064 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 RPS6KA1Q15418 735 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TAZQ16635 292 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 UGP2Q16851 508 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 INAVAQ3KP66 663 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 TCEAL6Q6IPX3 200 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCDC70Q6NSX1 233 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 NPNTQ6UXI9 565 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF662Q6ZS27 426 aa5.45□□□□□ -1.54
HMGB1P40-201ENST00000525121 BBS12Q6ZW61 710 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms