RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TCRBV9S1A1TA0A576 114 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 TLDC2A0PJX2 215 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 GMNCA6NCL1 334 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 FAM47DPA6NHR8 397 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SDR42E2A6NKP2 422 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 FAM159BA6NKW6 160 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 RASA4BC9J798 803 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 E9PAM4 449 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SIAH2O43255 324 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 RASA4O43374 803 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 LAMTOR5O43504 91 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 KRT37O76014 449 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 KRT38O76015 456 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ZWINTO95229 277 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 METTL18O95568 372 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CPP00450 1065 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 C1QAP02745 245 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CYP17A1P05093 508 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SP9P0CG40 484 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 PGAM1P18669 254 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 GCAP28676 217 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ELK3P41970 407 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 MSH2P43246 934 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SLC6A11P48066 632 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NPY2RP49146 381 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 GALK1P51570 392 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 GYS2P54840 703 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SEC13P55735 322 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SATB1Q01826 763 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 KDSRQ06136 332 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 DMWDQ09019 674 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 MESP2Q0VG99 397 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 AP1B1Q10567 949 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 EFEMP1Q12805 493 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 HNRNPDQ14103 355 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 PRPSAP1Q14558 356 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 FASTKD3Q14CZ7 662 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 PDGFRLQ15198 375 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 GAB4Q2WGN9 574 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 BBS9Q3SYG4 887 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SPANXN3Q5MJ09 141 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 C10orf120Q5SQS8 335 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 KCTD11Q693B1 232 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NAPEPLDQ6IQ20 393 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 MICALCLQ6ZW33 695 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 YTHDF3Q7Z739 585 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 LCA5Q86VQ0 697 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 C12orf40Q86WS4 652 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 RALGPS2Q86X27 583 aaPredicted RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 MIB1Q86YT6 1006 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ARHGAP12Q8IWW6 846 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 BBS7Q8IWZ6 715 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ZNF567Q8N184 647 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CPA6Q8N4T0 437 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ATPAF2Q8N5M1 289 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NPWQ8N729 165 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NAT16Q8N8M0 369 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CCNYQ8ND76 341 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CCDC110Q8TBZ0 833 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ACMSDQ8TDX5 336 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CDKL2Q92772 493 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 EZH1Q92800 747 aaPredicted RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 ATP2A3Q93084 1043 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 BHMTQ93088 406 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CLDN23Q96B33 292 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 XPO6Q96QU8 1125 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 FCRL5Q96RD9 977 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SMC6Q96SB8 1091 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 PAFAH2Q99487 392 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 LGMNQ99538 433 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 PRRX2Q99811 253 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 DDX50Q9BQ39 737 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 WDR83Q9BRX9 315 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 IL22Q9GZX6 179 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ZDHHC4Q9NPG8 344 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 ANLNQ9NQW6 1124 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 INTS9Q9NV88 658 aaKnown RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 TOR4AQ9NXH8 423 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NSMCE4AQ9NXX6 385 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 NKIRAS1Q9NYS0 192 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 MOCS1Q9NZB8 636 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 MARCH2Q9P0N8 246 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 BCCIPQ9P287 314 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS11-201ENST00000524454 KLHL8Q9P2G9 620 aaPredicted RBP7.18□□□□□ -1.26
VPS11-201ENST00000524454 ZMYM5Q9UJ78 669 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 DNMT3LQ9UJW3 386 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 SH3BP1Q9Y3L3 701 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 HS3ST4Q9Y661 456 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 EML5Q05BV3 1969 aa7.18□□□□□ -1.26
VPS11-201ENST00000524454 CACNA1IQ9P0X4 2223 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 SYNJ2BP-COX16A0A087WUM0 186 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 FAM237BA0A1B0GVD1 139 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TCRBV7S3A2A0A539 114 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 ARHGAP42A6NI28 874 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 NDUFAB1O14561 156 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 TRIM24O15164 1050 aa7.17□□□□□ -1.26
VPS11-201ENST00000524454 GFRA3O60609 400 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms