RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 RESP18Q5W5W9 173 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ATL3Q6DD88 541 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PM20D1Q6GTS8 502 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PTAR1Q7Z6K3 402 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 IQCHQ86VS3 1027 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 HSCBQ8IWL3 235 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 LGI2Q8N0V4 545 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ATP6V0D2Q8N8Y2 350 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 FIBINQ8TAL6 211 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 WFDC5Q8TCV5 224 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 MAPK15Q8TD08 544 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 IRGQQ8WZA9 623 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PAGE5Q96GU1 130 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 CCDC120Q96HB5 630 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PPP1R16AQ96I34 528 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 COX4I2Q96KJ9 171 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 MYOCQ99972 504 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 DPH1Q9BZG8 443 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 KCTD10Q9H3F6 313 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 MTG2Q9H4K7 406 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 USP29Q9HBJ7 922 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PREBQ9HCU5 417 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 NCKIPSDQ9NZQ3 722 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 SERGEFQ9UGK8 458 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 IPO11Q9UI26 975 aaKnown RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 TRAF3IP3Q9Y228 551 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ITPR1Q14643 2758 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SMG1Q96Q15 3661 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 TP53BP1Q12888 1972 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 A0A1W2PR77 199 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 YJEFN3A6XGL0 299 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 TTC34A8MYJ7 566 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 E7ENQ6 273 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 KPNA3O00505 521 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ARHGAP6O43182 974 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SIGLEC6O43699 453 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 CSO75390 466 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PCDH8O95206 1070 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ESR1P03372 595 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 WNT1P04628 370 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 THEGLP0DJG4 465 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 C6P13671 934 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PDGFRAP16234 1089 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SYKP43405 635 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 KIR3DL1P43629 444 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RXRGP48443 463 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ERVPABLB-1P60509 514 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 HNRNPKP61978 463 aaKnown RBP eCLIP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ETF1P62495 437 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PPP2CBP62714 309 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RPS24P62847 133 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PPP2CAP67775 309 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PPP3CAQ08209 521 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 STIM1Q13586 685 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 CUL2Q13617 745 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SLC12A1Q13621 1099 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 NFIL3Q16649 462 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 C9orf64Q5T6V5 341 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SFMBT2Q5VUG0 894 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RAP1GAP2Q684P5 730 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 MSANTD2Q6P1R3 559 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 KIAA0907Q7Z7F0 614 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ERICH1Q86X53 443 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PPM1KQ8N3J5 372 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ARL14Q8N4G2 192 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 DCBLD1Q8N8Z6 715 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RBBP8NLQ8NC74 664 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 OR4C6Q8NH72 309 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 UBA3Q8TBC4 463 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 TMEM174Q8WUU8 243 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RFFLQ8WZ73 363 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 NDRG1Q92597 394 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 TTC17Q96AE7 1141 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 WBP1Q96G27 269 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 BTN2A3PQ96KV6 586 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 RPL10LQ96L21 214 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PRICKLE1Q96MT3 831 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 NT5C1BQ96P26 610 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
PABPC1-220ENST00000522658 MIS12Q9H081 205 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 FAM204AQ9H8W3 233 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 POLR1BQ9H9Y6 1135 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 CPNE5Q9HCH3 593 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 DNAJC28Q9NX36 388 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 CYTH4Q9UIA0 394 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 STOML2Q9UJZ1 356 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 KIAA1257Q9ULG3 409 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PCDHA7Q9UN72 937 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 TLR6Q9Y2C9 796 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 PCDHB4Q9Y5E5 795 aa6.4□□□□□ -1.38
PABPC1-220ENST00000522658 ITIH6Q6UXX5 1313 aa6.4□□□□□ -1.39
PABPC1-220ENST00000522658 PLXNA2O75051 1894 aa6.4□□□□□ -1.39
PABPC1-220ENST00000522658 GOLGA4Q13439 2230 aaKnown RBP6.4□□□□□ -1.39
PABPC1-220ENST00000522658 CELSR3Q9NYQ7 3312 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SHROOM3Q8TF72 1996 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SYNJ2BP-COX16A0A087WUM0 186 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 GOLGA6L7A0A1B0GV03 622 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 A0A1B0GVM2 712 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms