RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 IGHMBP2P38935 993 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RPL3P39023 403 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 USP8P40818 1118 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LEPRP48357 1165 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MMP14P50281 582 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TERF1P54274 439 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GNAI1P63096 354 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IL9RQ01113 521 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 OCRLQ01968 901 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DEUP1Q05D60 604 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CCDC15Q0P6D6 951 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CAMK1Q14012 370 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PTK2BQ14289 1009 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYBPC2Q14324 1141 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FASTKD3Q14CZ7 662 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IQCB1Q15051 598 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 OASLQ15646 514 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 Q1RN00 199 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KRTAP19-7Q3SYF9 63 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CCDC93Q567U6 631 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VWA2Q5GFL6 755 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MUM1L1Q5H9M0 696 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SIRPB2Q5JXA9 342 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM160B1Q5W0V3 765 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SAXO2Q658L1 398 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HEPHL1Q6MZM0 1159 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RHBDD2Q6NTF9 364 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM71Q6P5X7 295 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DHRS13Q6UX07 377 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SH2D5Q6ZV89 423 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NECAB2Q7Z6G3 386 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SFTPA2Q8IWL1 248 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM71DQ8N9W8 422 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 OR52N4Q8NGI2 321 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EXD1Q8NHP7 514 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BBS10Q8TAM1 723 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BRIX1Q8TDN6 353 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRRC15Q8TF66 581 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FATE1Q969F0 183 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TADA1Q96BN2 335 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PDLIM5Q96HC4 596 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRICKLE1Q96MT3 831 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM161BQ96MY7 647 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GFM1Q96RP9 751 aaKnown RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KRT12Q99456 494 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF184Q99676 751 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CINPQ9BW66 212 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VN1R3Q9BXE9 311 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GLIS2Q9BZE0 524 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TTYH3Q9C0H2 523 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CSTL1Q9H114 145 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BRD9Q9H8M2 597 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VTI1BQ9UEU0 232 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FBXL17Q9UF56 701 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ASAP1Q9ULH1 1129 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SHOC2Q9UQ13 582 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CDK11AQ9UQ88 783 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CD2APQ9Y5K6 639 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STK36Q9NRP7 1315 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FRAS1Q86XX4 4008 aa-0.71□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGLV5-45A0A087WSX0 123 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRBV5-7A0A0A0MS05 114 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TCRBV16S1A1N1A0A5B0 115 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM150BA6NC51 233 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TTC34A8MYJ7 566 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SHISA9B4DS77 424 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRIM49D1C9J1S8 452 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 F8VVB4 439 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 F8VWA3 439 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 hCG_1984214I3L0E3 225 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 J3QRE1 110 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 M0QYG6 137 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SYNGR3O43761 229 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MAGEC1O60732 1142 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GALR3O60755 368 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RFPL2O75678 378 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GLRX3O76003 335 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGKV1-39P01597 117 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGKV1D-39P04432 117 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LPLP06858 475 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DCNP07585 359 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HMBSP08397 361 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KRT13P13646 458 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PDIA4P13667 645 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ENPP1P22413 925 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KLRC1P26715 233 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CDH5P33151 784 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RPL34P49207 117 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MTHFSP49914 203 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ABCE1P61221 599 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ADORA2A-AS1P86434 159 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SATB1Q01826 763 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CALCOCO2Q13137 446 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KIAA0141Q14154 515 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TAZQ16635 292 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ANO4Q32M45 955 aa-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EAPPQ56P03 285 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CERCAMQ5T4B2 595 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms