RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 LMO7DNF2Z398 122 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 J3KR12 359 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KRIT1O00522 736 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RRP8O43159 456 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KDELR3O43731 214 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GFPT2O94808 682 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TMCC1O94876 653 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PIGNO95427 931 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PLEKP08567 350 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RHOQP17081 205 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ETV5P41161 510 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HNRNPKP61978 463 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RPL7AP62424 266 aaKnown RBP8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCL7P80098 99 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 NFKB2Q00653 900 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SLC20A2Q08357 652 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 IRF4Q15306 451 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF805Q5CZA5 627 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FAM182AQ5T1J6 154 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KIAA1161Q6NSJ0 714 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF783Q6ZMS7 281 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LRRC69Q6ZNQ3 347 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CYP4V2Q6ZWL3 525 aaPredicted RBP8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZDHHC17Q8IUH5 632 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF248Q8NDW4 579 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 OR2AP1Q8NGE2 309 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCL4L1Q8NHW4 92 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ASB12Q8WXK4 309 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCDC34Q96HJ3 373 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SMIM14Q96QK8 99 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LGMNQ99538 433 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 C11orf70Q9BRQ4 267 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SYT11Q9BT88 431 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 STK33Q9BYT3 514 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TRIM7Q9C029 511 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CLSTN2Q9H4D0 955 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SYNCQ9H7C4 482 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PDFQ9HBH1 243 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GPATCH2LQ9NWQ4 482 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RRN3Q9NYV6 651 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TAS2R14Q9NYV8 317 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MFHAS1Q9Y4C4 1052 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CSNK1G3Q9Y6M4 447 aa8.38□□□□□ -1.07
SCARNA20.3-201ENST00000516913 UNC13CQ8NB66 2214 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TMEM202A6NGA9 273 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 K7ENP7 123 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TSPAN6O43657 245 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MAGEC1O60732 1142 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 GSRP00390 522 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 F9P00740 461 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ITGB6P18564 788 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RABIFP47224 123 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCBP4P57723 403 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ERVPABLB-1P60509 514 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CDR2Q01850 454 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RALGDSQ12967 914 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ARL13BQ3SXY8 428 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TMEM52BQ4KMG9 183 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 C6orf132Q5T0Z8 1188 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CDKAL1Q5VV42 579 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RETSATQ6NUM9 610 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RWDD4Q6NW29 188 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZCCHC8Q6NZY4 707 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 INO80CQ6PI98 192 aaPredicted RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LRRC31Q6UY01 552 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 RFLNAQ6ZTI6 216 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ARCQ7LC44 396 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CLEC14AQ86T13 490 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ZNF605Q86T29 641 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 CAMK1DQ8IU85 385 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MLKLQ8NB16 471 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LSM14AQ8ND56 463 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PCDH19Q8TAB3 1148 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FAM172AQ8WUF8 416 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 KCNE4Q8WWG9 221 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HTR3CQ8WXA8 447 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 OR1E3Q8WZA6 343 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 COL26A1Q96A83 441 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PDXPQ96GD0 296 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 DEPDC7Q96QD5 511 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 PEBP4Q96S96 227 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 EPAS1Q99814 870 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 LGR4Q9BXB1 951 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 FGF22Q9HCT0 170 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 MRPL40Q9NQ50 206 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 HOOK1Q9UJC3 728 aaKnown RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 OR1A2Q9Y585 309 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
SCARNA20.3-201ENST00000516913 ITPR2Q14571 2701 aa8.36□□□□□ -1.07
SCARNA20.3-201ENST00000516913 TSPAN11A1L157 253 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms