RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 LRRN4Q8WUT4 740 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 UBE2Q2Q8WVN8 375 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 MAML1Q92585 1016 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 ALG3Q92685 438 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 NUDCD1Q96RS6 583 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 LGMNQ99538 433 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 MGME1Q9BQP7 344 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 RBM22Q9NW64 420 aaKnown RBP eCLIP26.26■■□□□ 1.79
DDR1-279ENST00000515529 DKK3Q9UBP4 350 aa26.26■■□□□ 1.79
DDR1-279ENST00000515529 DMDP11532 3685 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 A0A1B0GTW7 788 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 PRR5-ARHGAP8B1AHC4 643 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 RNGTTO60942 597 aaKnown RBP26.25■■□□□ 1.79
DDR1-279ENST00000515529 SF3A2Q15428 464 aaKnown RBP26.25■■□□□ 1.79
DDR1-279ENST00000515529 RALGPS1Q5JS13 557 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 NEK5Q6P3R8 708 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 BRAT1Q6PJG6 821 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 PRPF39Q86UA1 669 aaKnown RBP26.25■■□□□ 1.79
DDR1-279ENST00000515529 CAMK1DQ8IU85 385 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 TEX26Q8N6G2 289 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 HCAR2Q8TDS4 363 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 PDLIM2Q96JY6 352 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 OSBPL8Q9BZF1 889 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 POLR1EQ9GZS1 481 aaKnown RBP26.25■■□□□ 1.79
DDR1-279ENST00000515529 SEPT10Q9P0V9 454 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 AMACRQ9UHK6 382 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 EFR3BQ9Y2G0 817 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 RALGAPA1Q6GYQ0 2036 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 SHROOM3Q8TF72 1996 aa26.25■■□□□ 1.79
DDR1-279ENST00000515529 PTPRZ1P23471 2315 aaPredicted RBP26.24■■□□□ 1.79
DDR1-279ENST00000515529 BCAT2O15382 392 aaPredicted RBP26.24■■□□□ 1.79
DDR1-279ENST00000515529 IGHV4-34P06331 123 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 TAS2R38P59533 333 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 MAXP61244 160 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 PPP2CBP62714 309 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 PPP2CAP67775 309 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 LMNB2Q03252 620 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 BBS12Q6ZW61 710 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 TRIM69Q86WT6 500 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 PGBD5Q8N414 524 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 HAUS1Q96CS2 278 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 FEM1CQ96JP0 617 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 OLFM3Q96PB7 478 aa26.24■■□□□ 1.79
DDR1-279ENST00000515529 GON4LQ3T8J9 2241 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 PATE3B3GLJ2 98 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 AP1G1O43747 822 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 TGM1P22735 817 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 MAT2AP31153 395 aaKnown RBP26.23■■□□□ 1.79
DDR1-279ENST00000515529 PTPN7P35236 360 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 NUDT1P36639 197 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 SUOXP51687 545 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 SETMARQ53H47 684 aaPredicted RBP26.23■■□□□ 1.79
DDR1-279ENST00000515529 TCEAL6Q6IPX3 200 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 HORMAD1Q86X24 394 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 TFB1MQ8WVM0 346 aaKnown RBP26.23■■□□□ 1.79
DDR1-279ENST00000515529 TCEAL3Q969E4 200 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 SAE1Q9UBE0 346 aaPredicted RBP26.23■■□□□ 1.79
DDR1-279ENST00000515529 SLC6A14Q9UN76 642 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 FADS3Q9Y5Q0 445 aa26.23■■□□□ 1.79
DDR1-279ENST00000515529 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.23■■□□□ 1.79
DDR1-279ENST00000515529 A0A1W2PPC4 97 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 A0A1W2PQU0 124 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 KCNK1O00180 336 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 TSPAN6O43657 245 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 TJP3O95049 919 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 JCHAINP01591 159 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 SERPINF2P08697 491 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 PYGMP11217 842 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 PECAM1P16284 738 aaPredicted RBP26.22■■□□□ 1.79
DDR1-279ENST00000515529 CES1P23141 567 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 TEAD4Q15561 434 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 ERAP2Q6P179 960 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 SLC23A3Q6PIS1 610 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 HES6Q96HZ4 224 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 SEMA3CQ99985 751 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 NOD2Q9HC29 1040 aa26.22■■□□□ 1.79
DDR1-279ENST00000515529 TNRC6BQ9UPQ9 1833 aaKnown RBP26.22■■□□□ 1.79
DDR1-279ENST00000515529 TTC24A2A3L6 582 aaPredicted RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 GOLGA6L9A6NEM1 432 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 UPK3BL1B0FP48 263 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 UPK3BL2E5RIL1 263 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 APOC4-APOC2K7ER74 178 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 DDX3YO15523 660 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 ZSCAN12O43309 604 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 GJB3O75712 270 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 APOC2P02655 101 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 CR2P20023 1033 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 ABL2P42684 1182 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 POLR2LP62875 67 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 RPS21P63220 83 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 IFI35P80217 286 aaPredicted RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 ADCY2Q08462 1091 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 ELP6Q0PNE2 266 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 ZNF211Q13398 564 aaPredicted RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 LRRC73Q5JTD7 316 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 KIAA1161Q6NSJ0 714 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 ADAT2Q7Z6V5 191 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 ZC3H18Q86VM9 953 aaKnown RBP26.21■■□□□ 1.79
DDR1-279ENST00000515529 ZSCAN30Q86W11 494 aa26.21■■□□□ 1.79
DDR1-279ENST00000515529 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms