RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TUBGCP5Q96RT8 1024 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TMEM121Q9BTD3 319 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TUBB2BQ9BVA1 445 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 AP1M1Q9BXS5 423 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 OSBPL1AQ9BXW6 950 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CPEB1Q9BZB8 566 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MKRN2Q9H000 416 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MTG2Q9H4K7 406 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ZDHHC6Q9H6R6 413 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 USP29Q9HBJ7 922 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 C2orf42Q9NWW7 574 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SMARCAL1Q9NZC9 954 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 BCCIPQ9P287 314 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 HECAQ9UBI9 543 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 IL36AQ9UHA7 158 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 EVLQ9UI08 416 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CDC23Q9UJX2 597 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 FBXO4Q9UKT5 387 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TRHDEQ9UKU6 1024 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SCML1Q9UN30 329 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF148Q9UQR1 794 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 DRG1Q9Y295 367 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TTLL3Q9Y4R7 772 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TMEM131Q92545 1883 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 PLXNB3Q9ULL4 1909 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TDRD6O60522 2096 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC163A0A0D9SF12 145 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 C5orf60A6NFR6 353 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 K7ESF4 209 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 KPNA3O00505 521 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 DLL1O00548 723 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 INSIG1O15503 277 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SOCS5O75159 536 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 LEFTY1O75610 366 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 URI1O94763 535 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 IL1BP01584 269 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 DNTTP04053 509 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CTSLP07711 333 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SERPINF2P08697 491 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ACADMP11310 421 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 C5AR1P21730 350 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CA4P22748 312 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SERPINA4P29622 427 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 HOXA6P31267 233 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PSMD8P48556 350 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 GDF10P55107 478 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 DSC2Q02487 901 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ITKQ08881 620 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SFSWAPQ12872 951 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SNX1Q13596 522 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 MYLK3Q32MK0 819 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ANKRD20A2Q5SQ80 823 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ANKRD20A1Q5TYW2 823 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ANKRD20A3Q5VUR7 823 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ANO7Q6IWH7 933 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 NCEH1Q6PIU2 408 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC137Q6PK04 289 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 USP30Q70CQ3 517 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PID1Q7Z2X4 250 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SRLQ86TD4 932 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 KBTBD6Q86V97 674 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CACUL1Q86Y37 369 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 MMAAQ8IVH4 418 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PGBD3Q8N328 593 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CNTD1Q8N815 330 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC89Q8N998 374 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM71DQ8N9W8 422 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CHST14Q8NCH0 376 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 OR6K2Q8NGY2 324 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PIP4K2CQ8TBX8 421 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 GRK7Q8WTQ7 553 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PRCCQ92733 491 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 MAGOHBQ96A72 148 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ERLEC1Q96DZ1 483 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SIPA1Q96FS4 1042 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF641Q96N77 438 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 RUNDC3BQ96NL0 473 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PPP1R2P1Q96PQ5 205 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM129BQ96TA1 746 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SEMA3CQ99985 751 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM126AQ9BYI3 521 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CEP41Q9BYV8 373 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC25A51Q9H1U9 297 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 GBA3Q9H227 469 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 ATP13A3Q9H7F0 1226 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 GLOD4Q9HC38 313 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 POLR3BQ9NW08 1133 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 EBF1Q9UH73 591 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 RSPH14Q9UHP6 348 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 FEZ2Q9UHY8 353 aaPredicted RBP7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 PPM1HQ9ULR3 514 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 WASF2Q9Y6W5 498 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CACNA1EQ15878 2313 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 CACNA1HO95180 2353 aa7.67□□□□□ -1.18
HMGXB3-204ENST00000513318 LRP4O75096 1905 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 ADAMTS9Q9P2N4 1935 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 A0A1W2PQ67 120 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GOLGA6CA6NDK9 693 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 GOLGA6BA6NDN3 693 aa7.66□□□□□ -1.18
HMGXB3-204ENST00000513318 PDE2AO00408 941 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms