RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 AFF3P51826 1226 aaKnown RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 EPHB1P54762 984 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 C21orf59P57076 290 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 DYNLT1P63172 113 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 CCDC173Q0VFZ6 552 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 CNTN1Q12860 1018 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 OVGP1Q12889 678 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 XRCC4Q13426 336 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 STAT4Q14765 748 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 RPS6KA1Q15418 735 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 NCBP2-AS2Q69YL0 99 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 SLC9A4Q6AI14 798 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 NCEH1Q6PIU2 408 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 LEKR1Q6ZMV7 388 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 ARMCX6Q7L4S7 300 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 CDKL3Q8IVW4 592 aaPredicted RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 ARHGAP12Q8IWW6 846 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 NPWQ8N729 165 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 PLD5Q8N7P1 536 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 CXorf40AQ8TE69 158 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 TFB1MQ8WVM0 346 aaKnown RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 NUDCD1Q96RS6 583 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 SRPK1Q96SB4 655 aaKnown RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 ADGRE3Q9BY15 652 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 FRMD8P1Q9BZ68 369 aaPredicted RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 OSBPL8Q9BZF1 889 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 LACRTQ9GZZ8 138 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 AASDHPPTQ9NRN7 309 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 RBM22Q9NW64 420 aaKnown RBP eCLIP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 GOLGA6AQ9NYA3 693 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 EVLQ9UI08 416 aaPredicted RBP7.56□□□□□ -1.2
NR1I3-231ENST00000512340 SLC6A14Q9UN76 642 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 HYOU1Q9Y4L1 999 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 TTLL3Q9Y4R7 772 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 WASF2Q9Y6W5 498 aa7.56□□□□□ -1.2
NR1I3-231ENST00000512340 CHD5Q8TDI0 1954 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PLXND1Q9Y4D7 1925 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 GRID2IPA4D2P6 1211 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ANTXRLA6NF34 631 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PRAMEF26H0Y7S4 382 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 H7C0C1 242 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 APOC4-APOC2K7ER74 178 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 TOR1BO14657 336 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 INSIG1O15503 277 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PLRG1O43660 514 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 MFSD11O43934 449 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CER1O95813 267 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 APOC2P02655 101 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CD48P09326 243 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CYP2A6P11509 494 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 BCKDHBP21953 392 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 IL4RP24394 825 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ACSL1P33121 698 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PTPN7P35236 360 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CDKN2BP42772 138 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ATP5OP48047 213 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ADPRHP54922 357 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 RPL26P61254 145 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PPIDQ08752 370 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 SPEM2Q0P670 501 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PRPSAP1Q14558 356 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 SETDB1Q15047 1291 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CYTH1Q15438 398 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ZKSCAN8Q15776 578 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 TRIM61Q5EBN2 209 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ATXN7L2Q5T6C5 722 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ARMC12Q5T9G4 340 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ITPRIPL1Q6GPH6 555 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 MFSD7Q6UXD7 560 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 BBS12Q6ZW61 710 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 USP45Q70EL2 814 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 NT5DC3Q86UY8 548 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 TRIM69Q86WT6 500 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 HORMAD1Q86X24 394 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 DCP2Q8IU60 420 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 KIAA2013Q8IYS2 634 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 OXR1Q8N573 874 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 LRRC57Q8N9N7 239 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 TSEN2Q8NCE0 465 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 CHST14Q8NCH0 376 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 OR6K2Q8NGY2 324 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PDCD6IPQ8WUM4 868 aaKnown RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 SERAC1Q96JX3 654 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 KLHL32Q96NJ5 620 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 NAP1L3Q99457 506 aaPredicted RBP7.55□□□□□ -1.2
NR1I3-231ENST00000512340 MGME1Q9BQP7 344 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 KLC2Q9H0B6 622 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 PDFQ9HBH1 243 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 NT5MQ9NPB1 228 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 HOMER3Q9NSC5 361 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 ETNK2Q9NVF9 386 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
NR1I3-231ENST00000512340 SEPT10Q9P0V9 454 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms