RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF778Q96MU6 729 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 MRPL57Q9BQC6 102 aaKnown RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 TSPAN1O60635 241 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 RNASEH2AO75792 299 aaKnown RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 HGFP14210 728 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 PRDX6P30041 224 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 CXCR3P49682 368 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 SLC5A3P53794 718 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TARBP2Q15633 366 aaKnown RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 REP15Q6BDI9 236 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 FBXL19Q6PCT2 694 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 UTS2BQ765I0 119 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TMEM110Q86TL2 294 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 SPATA2LQ8IUW3 424 aaPredicted RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 ULK4Q96C45 1275 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 C1orf50Q9BV19 199 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 ABI2Q9NYB9 513 aaPredicted RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 MPP6Q9NZW5 540 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 FZD10Q9ULW2 581 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TSC22D4Q9Y3Q8 395 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TCRBV5S1A1TA0A578 114 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TTC36A6NLP5 189 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 MYO1GB0I1T2 1018 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 LTA4HP09960 611 aaKnown RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 MS4A2Q01362 244 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 MSLNQ13421 630 aaPredicted RBP15.01□□□□□ -0.01
USP38-202ENST00000510377 PERM1Q5SV97 790 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TRIM74Q86UV6 250 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TRIM73Q86UV7 250 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 THEM5Q8N1Q8 247 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 RIN3Q8TB24 985 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 SLC35F5Q8WV83 523 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 CANT1Q8WVQ1 401 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 PIGVQ9NUD9 493 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 NDFIP2Q9NV92 336 aa15.01□□□□□ -0.01
USP38-202ENST00000510377 TBC1D4O60343 1298 aa15□□□□□ -0.01
USP38-202ENST00000510377 PCSK1P29120 753 aa15□□□□□ -0.01
USP38-202ENST00000510377 YAP1P46937 504 aaKnown RBP15□□□□□ -0.01
USP38-202ENST00000510377 LSM3P62310 102 aaKnown RBP15□□□□□ -0.01
USP38-202ENST00000510377 ADCK1Q86TW2 530 aa15□□□□□ -0.01
USP38-202ENST00000510377 ZNF410Q86VK4 478 aa15□□□□□ -0.01
USP38-202ENST00000510377 RAET1EQ8TD07 263 aa15□□□□□ -0.01
USP38-202ENST00000510377 SENP8Q96LD8 212 aa15□□□□□ -0.01
USP38-202ENST00000510377 SORT1Q99523 831 aa15□□□□□ -0.01
USP38-202ENST00000510377 TRIM8Q9BZR9 551 aa15□□□□□ -0.01
USP38-202ENST00000510377 PLGRKTQ9HBL7 147 aa15□□□□□ -0.01
USP38-202ENST00000510377 UGT1A6P19224 532 aa15□□□□□ -0.01
USP38-202ENST00000510377 YWHAQP27348 245 aa15□□□□□ -0.01
USP38-202ENST00000510377 PCYT1AP49585 367 aa15□□□□□ -0.01
USP38-202ENST00000510377 GTF2H3Q13889 308 aa15□□□□□ -0.01
USP38-202ENST00000510377 AASDHQ4L235 1098 aaPredicted RBP15□□□□□ -0.01
USP38-202ENST00000510377 ZC3H15Q8WU90 426 aaKnown RBP15□□□□□ -0.01
USP38-202ENST00000510377 ZFP42Q96MM3 310 aa15□□□□□ -0.01
USP38-202ENST00000510377 KLHL5Q96PQ7 755 aa15□□□□□ -0.01
USP38-202ENST00000510377 C9orf16Q9BUW7 83 aa15□□□□□ -0.01
USP38-202ENST00000510377 GIMAP2Q9UG22 337 aa15□□□□□ -0.01
USP38-202ENST00000510377 CPA4Q9UI42 421 aa15□□□□□ -0.01
USP38-202ENST00000510377 MATN2O00339 956 aa15□□□□□ -0.01
USP38-202ENST00000510377 MAGEB3O15480 346 aa15□□□□□ -0.01
USP38-202ENST00000510377 H6PDO95479 791 aa15□□□□□ -0.01
USP38-202ENST00000510377 NCK1P16333 377 aa15□□□□□ -0.01
USP38-202ENST00000510377 CPOXP36551 454 aa15□□□□□ -0.01
USP38-202ENST00000510377 HARS2P49590 506 aaKnown RBP15□□□□□ -0.01
USP38-202ENST00000510377 ARHGAP17Q68EM7 881 aa15□□□□□ -0.01
USP38-202ENST00000510377 AHI1Q8N157 1196 aa15□□□□□ -0.01
USP38-202ENST00000510377 ZNF276Q8N554 614 aa15□□□□□ -0.01
USP38-202ENST00000510377 CNTD1Q8N815 330 aa15□□□□□ -0.01
USP38-202ENST00000510377 FIG4Q92562 907 aa15□□□□□ -0.01
USP38-202ENST00000510377 FAM162AQ96A26 154 aa15□□□□□ -0.01
USP38-202ENST00000510377 FAM193BQ96PV7 902 aaPredicted RBP15□□□□□ -0.01
USP38-202ENST00000510377 PARK7Q99497 189 aaKnown RBP15□□□□□ -0.01
USP38-202ENST00000510377 FAM8A1Q9UBU6 413 aa15□□□□□ -0.01
USP38-202ENST00000510377 CITO14578 2027 aa15□□□□□ -0.01
USP38-202ENST00000510377 A0A0J9YYE9 177 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 YJEFN3A6XGL0 299 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 GRM5P41594 1212 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 HPCAP84074 193 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 POU4F1Q01851 419 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 CHRNB3Q05901 458 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 NOMO2Q5JPE7 1267 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 PKN3Q6P5Z2 889 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 ANGPTL8Q6UXH0 198 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 NSMCE2Q96MF7 247 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 GAD1Q99259 594 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 UNC93B1Q9H1C4 597 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 FBRSL1Q9HCM7 1045 aaKnown RBP14.99□□□□□ -0.01
USP38-202ENST00000510377 MTF2Q9Y483 593 aaPredicted RBP14.99□□□□□ -0.01
USP38-202ENST00000510377 SHANK3Q9BYB0 1731 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 KATNA1O75449 491 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 LRIG2O94898 1065 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 ADGRG6Q86SQ4 1221 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 SLC22A9Q8IVM8 553 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 RDH11Q8TC12 318 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 PPP1R10Q96QC0 940 aaKnown RBP14.99□□□□□ -0.01
USP38-202ENST00000510377 DUSP16Q9BY84 665 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 OCEL1Q9H607 264 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 MRGBPQ9NV56 204 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 FADS3Q9Y5Q0 445 aa14.99□□□□□ -0.01
USP38-202ENST00000510377 GOLGA4Q13439 2230 aaKnown RBP14.99□□□□□ -0.01
USP38-202ENST00000510377 C16orf96A6NNT2 1141 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms