RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ASH1LQ9NR48 2969 aaKnown RBP16.13■□□□□ 0.17
RAB40C-202ENST00000509637 A0A1W2PQM1 296 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 TCRBV5S1A1TA0A578 114 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 NTN3O00634 580 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 TMCC1O94876 653 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 POP4O95707 220 aaKnown RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 LSM8O95777 96 aaKnown RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 PLEKP08567 350 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 RFC1P35251 1148 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 EIF4A3P38919 411 aaKnown RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 TMPRSS3P57727 454 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 CLN3Q13286 438 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 BECN1Q14457 450 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 NR0B2Q15466 257 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 KLHL40Q2TBA0 621 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 WSCD2Q2TBF2 565 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 C6orf132Q5T0Z8 1188 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 DENND6BQ8NEG7 585 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 TSACCQ96A04 125 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 RAB7BQ96AH8 199 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 WRAP53Q9BUR4 548 aaKnown RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 MAGEH1Q9H213 219 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 APOBEC3BQ9UH17 382 aaKnown RBP16.12■□□□□ 0.17
RAB40C-202ENST00000509637 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
RAB40C-202ENST00000509637 K7ENP7 123 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 NOBOXO60393 691 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-202ENST00000509637 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-202ENST00000509637 MAPKAPK2P49137 400 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 JAM2P57087 298 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 UBE2HP62256 183 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 VAC14Q08AM6 782 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 IRF4Q15306 451 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 TAF1BQ53T94 588 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-202ENST00000509637 ACBD5Q5T8D3 534 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-202ENST00000509637 INO80CQ6PI98 192 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-202ENST00000509637 WDR59Q6PJI9 974 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 GDPD4Q6W3E5 623 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 HMCESQ96FZ2 354 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 IL12RB2Q99665 862 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 EPAS1Q99814 870 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 CCDC3Q9BQI4 270 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 CLSTN2Q9H4D0 955 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 SPASTQ9UBP0 616 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 PADI4Q9UM07 663 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 PCDHGA8Q9Y5G5 932 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 TENM4Q6N022 2769 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 UNC13CQ8NB66 2214 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 AHCTF1Q8WYP5 2266 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 SCN8AQ9UQD0 1980 aa16.11■□□□□ 0.17
RAB40C-202ENST00000509637 CXorf51AA0A1B0GTR3 108 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 H3BM21 787 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 NEMP1O14524 444 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 PIGNO95427 931 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 PRKCGP05129 697 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 PTPN9P43378 593 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 RGRP47804 291 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
RAB40C-202ENST00000509637 CCL7P80098 99 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 CDR2Q01850 454 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 RHDQ02161 417 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 POLD3Q15054 466 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-202ENST00000509637 TGIF1Q15583 401 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 FOXR1Q6PIV2 292 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 RBM44Q6ZP01 1051 aaKnown RBP16.1■□□□□ 0.17
RAB40C-202ENST00000509637 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 EXD3Q8N9H8 876 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 KYQ8NBH2 561 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 TBC1D31Q96DN5 1066 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 WBP1Q96G27 269 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 EXOC2Q96KP1 924 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 DPH1Q9BZG8 443 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 TTYH3Q9C0H2 523 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 THSD1Q9NS62 852 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 MFHAS1Q9Y4C4 1052 aa16.1■□□□□ 0.17
RAB40C-202ENST00000509637 BUB1O43683 1085 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 RAMP2O60895 175 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 TM7SF2O76062 418 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 TNFSF15O95150 251 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 HGFP14210 728 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 GM2AP17900 193 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 ERCC5P28715 1186 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-202ENST00000509637 OGDHQ02218 1023 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-202ENST00000509637 TCP11X2Q5H9J9 407 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 FAXCQ5TGI0 409 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 MACC1Q6ZN28 852 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 STRADAQ7RTN6 431 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 TMPRSS9Q7Z410 1059 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 PELI3Q8N2H9 469 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 PLA2G15Q8NCC3 412 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms