RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MICALCLQ6ZW33 695 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TMEM150AQ86TG1 271 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 JAZF1Q86VZ6 243 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SPATA2LQ8IUW3 424 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 ARID3BQ8IVW6 561 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 ADSSL1Q8N142 457 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TMEM86AQ8N2M4 240 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MAB21L3Q8N8X9 362 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 C12orf29Q8N999 325 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 BOLLQ8N9W6 283 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 SIMC1Q8NDZ2 872 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PRSS33Q8NF86 280 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MYCBPAPQ8TBZ2 947 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SPPL2BQ8TCT7 592 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TAS1R2Q8TE23 839 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SMARCD2Q92925 531 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PSMG2Q969U7 264 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SYAP1Q96A49 352 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 ELSPBP1Q96BH3 223 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TIGD1Q96MW7 591 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 GSDMAQ96QA5 445 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SLC22A12Q96S37 553 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 SYT15Q9BQS2 421 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MED10Q9BTT4 135 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 APOBEC3GQ9HC16 384 aaKnown RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZFP14Q9HCL3 533 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TMEM30AQ9NV96 361 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 RMND1Q9NWS8 449 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 MAGEC2Q9UBF1 373 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 CHORDC1Q9UHD1 332 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 CDH9Q9ULB4 789 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 DUSP12Q9UNI6 340 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 TRAF3IP3Q9Y228 551 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ASB3Q9Y575 518 aa4.8□□□□□ -1.64
NUP54-206ENST00000508465 ZFP37Q9Y6Q3 630 aaPredicted RBP4.8□□□□□ -1.64
NUP54-206ENST00000508465 hCG_2014768A0A024R1R8 64 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 F8VP50 259 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 IKBKBO14920 756 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ECI2O75521 394 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 PRAMEF12O95522 483 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CALCAP01258 141 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CCDC130P13994 396 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TYRP1P17643 537 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CD58P19256 250 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ATICP31939 592 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 PIK3CAP42336 1068 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 PGFP49763 221 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CLCN5P51795 746 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 NDST1P52848 882 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 AP3M2P53677 418 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 RPL10AP62906 217 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 DUSP2Q05923 314 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 LRMPQ12912 555 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 UBXN2BQ14CS0 331 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 VEPH1Q14D04 833 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 NFE2Q16621 373 aaPredicted RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 ZNF699Q32M78 642 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ZNF667Q5HYK9 610 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 EGFLAMQ63HQ2 1017 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 PAQR9Q6ZVX9 377 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ITIH5Q86UX2 942 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CREBRFQ8IUR6 639 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 MFSD6LQ8IWD5 586 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 YAF2Q8IY57 180 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ZZZ3Q8IYH5 903 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 B3GALNT2Q8NCR0 500 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CPEB3Q8NE35 698 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 SPATA20Q8TB22 786 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 C2orf15Q8WU43 125 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 TMEM174Q8WUU8 243 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 NELFBQ8WX92 580 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 MYLPFQ96A32 169 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 JAKMIP2Q96AA8 810 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 FAM122AQ96E09 287 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 PCED1BQ96HM7 432 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 KCNK16Q96T55 309 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 SOX7Q9BT81 388 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TRMT61BQ9BVS5 477 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 LSM14BQ9BX40 385 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 ZNF518BQ9C0D4 1074 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 BRD9Q9H8M2 597 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TBC1D17Q9HA65 648 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TRPC7Q9HCX4 862 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 HEBP1Q9NRV9 189 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 GKN1Q9NS71 199 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 USP36Q9P275 1121 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 WNT16Q9UBV4 365 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 TESQ9UGI8 421 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 HMGXB4Q9UGU5 601 aa4.79□□□□□ -1.64
NUP54-206ENST00000508465 HOOK1Q9UJC3 728 aaKnown RBP4.79□□□□□ -1.64
NUP54-206ENST00000508465 CCL26Q9Y258 94 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms