RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 MAGEC1O60732 1142 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 GJB6O95452 261 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 C1QTNF9P0C862 333 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 GZMAP12544 262 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 SPINK2P20155 84 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 GLDCP23378 1020 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 HTR7P34969 479 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 RECQLP46063 649 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ARRB1P49407 418 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 NXPH1P58417 271 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 RPL7AP62424 266 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 MAMLD1Q13495 774 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 NR1I3Q14994 352 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 IQCB1Q15051 598 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 SHBQ15464 509 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 CDO1Q16878 200 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FILIP1LQ4L180 1135 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 SETMARQ53H47 684 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 CARD16Q5EG05 197 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FAM72AQ5TYM5 149 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 PLEKHA7Q6IQ23 1121 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FAM72DQ6L9T8 149 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 DNAJC24Q6P3W2 148 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 LAYNQ6UX15 382 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ERN2Q76MJ5 926 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 SLFN11Q7Z7L1 901 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ZSCAN30Q86W11 494 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ATCAYQ86WG3 371 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 HORMAD1Q86X24 394 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FAM72BQ86X60 149 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 CHCHD4Q8N4Q1 142 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 OXR1Q8N573 874 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 CCDC185Q8N715 623 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 TMEM145Q8NBT3 493 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 CHST14Q8NCH0 376 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 SAP25Q8TEE9 199 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ARHGEF2Q92974 986 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 GTPBP3Q969Y2 492 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 VOPP1Q96AW1 172 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 TBC1D31Q96DN5 1066 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ZNF837Q96EG3 531 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 EIF3CQ99613 913 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 HEPHQ9BQS7 1158 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FUCA2Q9BTY2 467 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 ATP13A1Q9HD20 1204 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 GDF3Q9NR23 364 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 AASDHPPTQ9NRN7 309 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 NDFIP2Q9NV92 336 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 IL36AQ9UHA7 158 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 BTBD3Q9Y2F9 522 aa8.1□□□□□ -1.11
UBE2D3-222ENST00000508238 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 COL5A1P20908 1838 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 RNF103O00237 685 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 KPNA3O00505 521 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 KDELR3O43731 214 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 AP1G1O43747 822 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 RAMP2O60895 175 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 LEFTY1O75610 366 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 POP4O95707 220 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 GSRP00390 522 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 CAPNS1P04632 268 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 TNFAIP3P21580 790 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ITGB7P26010 798 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ACVRL1P37023 503 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 PRKCIP41743 596 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 IDH3AP50213 366 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 YBEYP58557 167 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 STAT4Q14765 748 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 POLD3Q15054 466 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ZNF284Q2VY69 593 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 INAVAQ3KP66 663 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 INO80DQ53TQ3 878 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 FIGNQ5HY92 759 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ALKBH2Q6NS38 261 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 RWDD4Q6NW29 188 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 DCUN1D2Q6PH85 259 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 FIGNL1Q6PIW4 674 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 CCNI2Q6ZMN8 369 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 TMPRSS7Q7RTY8 843 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 SPATS2Q86XZ4 545 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 DRC7Q8IY82 874 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 UMODL1-AS1Q8N2C9 162 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 RTL3Q8N8U3 475 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 FNIP1Q8TF40 1166 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 CASKIN2Q8WXE0 1202 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 ARRDC3Q96B67 414 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 PPP1R16AQ96I34 528 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 MAGEB5Q9BZ81 275 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 TTYH3Q9C0H2 523 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 NOL6Q9H6R4 1146 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 DYRK4Q9NR20 520 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 SEPT11Q9NVA2 429 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 PARVAQ9NVD7 372 aa8.09□□□□□ -1.11
UBE2D3-222ENST00000508238 DONSONQ9NYP3 566 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms