RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CSRP3P50461 194 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 ARSDP51689 593 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 EPHB1P54762 984 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 FAM189BP81408 668 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 MARC1Q5VT66 337 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 TMEM198Q66K66 360 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 IL31Q6EBC2 164 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 KDELC1Q6UW63 502 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 CCDC124Q96CT7 223 aaKnown RBP14.64□□□□□ -0.07
DDX41-208ENST00000507955 OLFM1Q99784 485 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 DDX50Q9BQ39 737 aaKnown RBP14.64□□□□□ -0.07
DDX41-208ENST00000507955 CYP4F12Q9HCS2 524 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 PRDM5Q9NQX1 630 aaPredicted RBP14.64□□□□□ -0.07
DDX41-208ENST00000507955 TREX1Q9NSU2 369 aa14.64□□□□□ -0.07
DDX41-208ENST00000507955 A0A0D9SEW6 157 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 AOC1P19801 751 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 SLC11A1P49279 550 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 PLK1P53350 603 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 IRX1P78414 480 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 ZNF33AQ06730 810 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 CDK18Q07002 472 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 NFE2Q16621 373 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 TRMT5Q32P41 509 aaKnown RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 TSTD2Q5T7W7 516 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 C1orf146Q5VVC0 180 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 NEPROQ6NW34 567 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 RNF111Q6ZNA4 994 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 FRMD7Q6ZUT3 714 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 KLHDC8BQ8IXV7 354 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 RAET1EQ8TD07 263 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 GPR78Q96P69 363 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 SP110Q9HB58 689 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 ENTPD7Q9NQZ7 604 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.63□□□□□ -0.072e-8■■□□□ 12.8
DDX41-208ENST00000507955 MARCH5Q9NX47 278 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 UXTQ9UBK9 157 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 SRRDQ9UH36 339 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 FBXO5Q9UKT4 447 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 ACOT9Q9Y305 439 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 ENPP3O14638 875 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 INPPL1O15357 1258 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 RPLP2P05387 115 aaKnown RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 STMN1P16949 149 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 CDK7P50613 346 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 RAB10P61026 200 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 SLC12A1Q13621 1099 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 FRG1Q14331 258 aaKnown RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 CSHL1Q14406 222 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 MAP3K21Q5TCX8 1036 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 LHX8Q68G74 356 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 NADSYN1Q6IA69 706 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 LRRC8EQ6NSJ5 796 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 TIGD7Q6NT04 549 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 EPGNQ6UW88 154 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 IZUMO2Q6UXV1 221 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 PPFIBP2Q8ND30 876 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 HIPK4Q8NE63 616 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 OR52K2Q8NGK3 314 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 BCL7CQ8WUZ0 217 aaPredicted RBP14.63□□□□□ -0.07
DDX41-208ENST00000507955 HEXDCQ8WVB3 486 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 C8orf48Q96LL4 319 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 SMIM14Q96QK8 99 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 FBXO44Q9H4M3 255 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 FRMPD3Q5JV73 1810 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 DOCK4Q8N1I0 1966 aa14.63□□□□□ -0.07
DDX41-208ENST00000507955 MTMR11A4FU01 709 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 UBTFL6P0CB48 400 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 HNRNPLP14866 589 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX41-208ENST00000507955 KCNA5P22460 613 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 DNAL1Q4LDG9 190 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 TMC7Q7Z402 723 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 LSMEM2Q8N112 164 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 UMODL1-AS1Q8N2C9 162 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 OR13J1Q8NGT2 312 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 OR6P1Q8NGX9 317 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 IMP4Q96G21 291 aaKnown RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 C1orf74Q96LT6 269 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 DNAJC28Q9NX36 388 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 MARCH4Q9P2E8 410 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 PSMD3O43242 534 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 OR1E1P30953 314 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 PDCD2Q16342 344 aaPredicted RBP14.62□□□□□ -0.07
DDX41-208ENST00000507955 POTEHQ6S545 545 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 ZYG11AQ6WRX3 759 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 LRRC8DQ7L1W4 858 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 SCLYQ96I15 445 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 SLC25A51Q9H1U9 297 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 ANGPTL2Q9UKU9 493 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 CRYL1Q9Y2S2 319 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 TARM1B6A8C7 271 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 SMIM24O75264 130 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 CIB2O75838 187 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 BAG2O95816 211 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 PRSS56P0CW18 603 aa14.62□□□□□ -0.07
DDX41-208ENST00000507955 RHOQP17081 205 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms