RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 THPOP40225 353 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 ARL1P40616 181 aaPredicted RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 PCYT1AP49585 367 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 CCR5P51681 352 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 YWHAZP63104 245 aaKnown RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 LPIN1Q14693 890 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 RETSATQ6NUM9 610 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 LRRTM4Q86VH4 590 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 PALB2Q86YC2 1186 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 GHDCQ8N2G8 530 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 ANKRD42Q8N9B4 389 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 TNIP2Q8NFZ5 429 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 CNOT9Q92600 299 aaKnown RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 HES6Q96HZ4 224 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 LMLNQ96KR4 655 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 SLC25A33Q9BSK2 321 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 PHF7Q9BWX1 381 aaPredicted RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 NPFFR1Q9GZQ6 430 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 EPHX3Q9H6B9 360 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 TLR8Q9NR97 1041 aaKnown RBP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 PPP1R14DQ9NXH3 145 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 PGAP2Q9UHJ9 254 aa3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.22□□□□□ -1.89
AC008539.1-201ENST00000507653 ADGRF5Q8IZF2 1346 aa3.21□□□□□ -1.89
AC008539.1-201ENST00000507653 A0A1B0GUV1 79 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 A0A1B0GVM2 712 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ARHGAP10A1A4S6 786 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 TEX22C9J3V5 150 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 CBX6O95503 412 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 PPP1R3DO95685 299 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 PCNAP12004 261 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF8P17098 575 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 GPTP24298 496 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 LIFRP42702 1097 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 PTPN9P43378 593 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 MXI1P50539 228 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 RAD23BP54727 409 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 DHX8Q14562 1220 aaKnown RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 OTUD3Q5T2D3 398 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ATG16L1Q676U5 607 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 LRRC8DQ7L1W4 858 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 CPOQ8IVL8 374 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 TCP11L2Q8N4U5 519 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 AADATQ8N5Z0 425 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 C11orf65Q8NCR3 313 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 OR14A16Q8NHC5 309 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ZCCHC10Q8TBK6 192 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ATOH1Q92858 354 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 USP13Q92995 863 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 CLK4Q9HAZ1 481 aaKnown RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 RIC8AQ9NPQ8 531 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 BEX4Q9NWD9 120 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 ALKBH4Q9NXW9 302 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 SLC25A10Q9UBX3 287 aaPredicted RBP3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 NDRG3Q9UGV2 375 aa3.21□□□□□ -1.9
AC008539.1-201ENST00000507653 A0A0U1RQF3 1178 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CPED1A4D0V7 1026 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 IFITM10A6NMD0 228 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PEX12O00623 359 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PER2O15055 1255 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 SLC16A5O15375 505 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 KCNJ13O60928 360 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CKMT1AP12532 417 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 SRD5A1P18405 259 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CD58P19256 250 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 FMO4P31512 558 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PMS2P54278 862 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 NR1H2P55055 460 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CYP4A11Q02928 519 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 POU5F1BQ06416 359 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 SLC12A1Q13621 1099 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CTTNQ14247 550 aaKnown RBP3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 HLFQ16534 295 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 TMEM95Q3KNT9 176 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PPP6R3Q5H9R7 873 aaPredicted RBP3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF766Q5HY98 468 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PRAMEF19Q5SWL8 479 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 CCDC129Q6ZRS4 1044 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 TMTC1Q8IUR5 882 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 SMC5Q8IY18 1101 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 NEXN-AS1Q8NBZ9 246 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 DNAAF1Q8NEP3 725 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 UBXN10Q96LJ8 280 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 LRFN5Q96NI6 719 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 DUX5Q96PT3 197 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 FUZQ9BT04 418 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PLSCR4Q9NRQ2 329 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 PCDHGB5Q9Y5G0 923 aa3.2□□□□□ -1.9
AC008539.1-201ENST00000507653 IGLV5-52A0A0A0MRZ9 124 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 HOXC11O43248 304 aaPredicted RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 ITM2AO43736 263 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 SERPINI2O75830 405 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF432O94892 652 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 NDUFB4O95168 129 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 VNN2O95498 520 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 HOXB5P09067 269 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 PLA2G2AP14555 144 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF12P17014 697 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms