RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RASGRP1O95267 797 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 CALB1P05937 261 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 MMEP08473 750 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 ITGA2BP08514 1039 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 PLEKP08567 350 aaPredicted RBP21.3■■□□□ 1
SQSTM1-210ENST00000506042 KRT3P12035 628 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 ACVRL1P37023 503 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 EIF4A3P38919 411 aaKnown RBP21.3■■□□□ 1
SQSTM1-210ENST00000506042 AIF1P55008 147 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 CDR2Q01850 454 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 SLFN11Q7Z7L1 901 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 NOP9Q86U38 636 aaKnown RBP21.3■■□□□ 1
SQSTM1-210ENST00000506042 SNRNP27Q8WVK2 155 aaKnown RBP21.3■■□□□ 1
SQSTM1-210ENST00000506042 RXFP2Q8WXD0 754 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 NTAN1Q96AB6 310 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 TMEM74Q96NL1 305 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 CCDC3Q9BQI4 270 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 WDR70Q9NW82 654 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 ENTPD2Q9Y5L3 495 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 ASXL3Q9C0F0 2248 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 LY6G6EA0A0G2JKS1 128 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 MYF5P13349 255 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 MMP8P22894 467 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 ABL2P42684 1182 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 EIF2B5Q13144 721 aaKnown RBP21.29■■□□□ 1
SQSTM1-210ENST00000506042 LRRC14Q15048 493 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 PARP15Q460N3 678 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 XKR5Q6UX68 686 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 EMC1Q8N766 993 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 CENPTQ96BT3 561 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 LIN37Q96GY3 246 aaPredicted RBP21.29■■□□□ 1
SQSTM1-210ENST00000506042 GFM1Q96RP9 751 aaKnown RBP21.29■■□□□ 1
SQSTM1-210ENST00000506042 SEPT10Q9P0V9 454 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 MFHAS1Q9Y4C4 1052 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 U3KQA8 63 aa21.29■■□□□ 1
SQSTM1-210ENST00000506042 PTPRQQ9UMZ3 2332 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 AREL1O15033 823 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 TMCC1O94876 653 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 LRIG2O94898 1065 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 TNFSF15O95150 251 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 C6P13671 934 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 KELP23276 732 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 EPHB2P29323 1055 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 HTR7P34969 479 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 MIIPQ5JXC2 388 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 MANEALQ5VSG8 457 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 NLRP14Q86W24 1093 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 DNAAF5Q86Y56 855 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 FAM172AQ8WUF8 416 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 TMEM159Q96B96 161 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 LRRC61Q9BV99 259 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 CPEB1Q9BZB8 566 aaKnown RBP21.28■■□□□ 1
SQSTM1-210ENST00000506042 GULP1Q9UBP9 304 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 ITM2BQ9Y287 266 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 LOC400499M0QZD8 3231 aa21.28■■□□□ 1
SQSTM1-210ENST00000506042 FGF10O15520 208 aaPredicted RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 MMP20O60882 483 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 CCDC172P0C7W6 258 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 TSHRP16473 764 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 GPD1P21695 349 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 NFKBIAP25963 317 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 IGFALSP35858 605 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 STAT1P42224 750 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 HK3P52790 923 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 KLHL40Q2TBA0 621 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 ZSCAN23Q3MJ62 389 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 C2CD6Q53TS8 623 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 TCP11X2Q5H9J9 407 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 PPP1R2P3Q6NXS1 205 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 BRAT1Q6PJG6 821 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 CLEC14AQ86T13 490 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 HID1Q8IV36 788 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 SLC35F3Q8IY50 421 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 RBFAQ8N0V3 343 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 RTL3Q8N8U3 475 aaKnown RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 MED8Q96G25 268 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 CCNL2Q96S94 520 aaPredicted RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 C11orf70Q9BRQ4 267 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 NAA15Q9BXJ9 866 aaKnown RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 ADAM22Q9P0K1 906 aa21.27■■□□□ 1
SQSTM1-210ENST00000506042 AKAP7Q9P0M2 348 aaPredicted RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 GCN1Q92616 2671 aaKnown RBP21.27■■□□□ 1
SQSTM1-210ENST00000506042 C2CD4BA6NLJ0 364 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 CDRT15L2A8MXV6 281 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 K7ENP7 123 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 PLD2O14939 933 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 YY2O15391 372 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 GFPT2O94808 682 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 GJB6O95452 261 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 JMJD7P0C870 316 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 INHBCP55103 352 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 C1orf61Q13536 156 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 C15orf59Q2T9L4 293 aaPredicted RBP21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 CCDC14Q49A88 953 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 HSP90AA4PQ58FG1 418 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 INO80CQ6PI98 192 aaPredicted RBP21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 CRTC1Q6UUV9 634 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 FBXO39Q8N4B4 442 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 ZSCAN1Q8NBB4 408 aa21.26■□□□□ 0.99
SQSTM1-210ENST00000506042 PCMTD1Q96MG8 357 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms