RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 H7C0S8 307 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CBX4O00257 560 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 DFFAO00273 331 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 KRIT1O00522 736 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 IGSF6O95976 241 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 C1QAP02745 245 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 PRNPP04156 253 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 MLNP12872 115 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 CD72P21854 359 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 RPL22P35268 128 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 NUDT1P36639 197 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 FDFT1P37268 417 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 LMNB2Q03252 620 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 HIBCHQ6NVY1 386 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 Q6ZVU0 165 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 PARS2Q7L3T8 475 aaKnown RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 TECPR1Q7Z6L1 1165 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 STK40Q8N2I9 435 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 ATG4AQ8WYN0 398 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 SCARF2Q96GP6 870 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 LRFN3Q9BTN0 628 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 WSB2Q9NYS7 404 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 GRHL1Q9NZI5 618 aa8.37□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 CAPN8A6NHC0 703 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ESPNB1AK53 854 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 GAPDHSO14556 408 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 HOXB2P14652 356 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 OXTRP30559 389 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TIE1P35590 1138 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 NBL1P41271 181 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 METAP1P53582 386 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 DMWDQ09019 674 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF658BQ4V348 819 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 IL31Q6EBC2 164 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 GDPD4Q6W3E5 623 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TTC30BQ8N4P2 665 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 HAUS1Q96CS2 278 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 EID2BQ96D98 161 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TXLNGYQ9BZA5 131 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TWSG1Q9GZX9 223 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 MAGEE1Q9HCI5 957 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SERGEFQ9UGK8 458 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SMAPO00193 183 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 RIOK3O14730 519 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 DAPK3O43293 454 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TNNT1P13805 278 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 CETN2P41208 172 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 DPTQ07507 201 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 LONRF2Q1L5Z9 754 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 GLE1Q53GS7 698 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 C11orf74Q86VG3 221 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 WDR83Q9BRX9 315 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SP110Q9HB58 689 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SMARCAL1Q9NZC9 954 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 FBXL21Q9UKT6 434 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TOR1BO14657 336 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 LEFTY1O75610 366 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 IGHV4-34P06331 123 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ABL2P42684 1182 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TMC3Q7Z5M5 1100 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 NETO2Q8NC67 525 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 GAB3Q8WWW8 586 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 OR8D1Q8WZ84 308 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SCRN2Q96FV2 425 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 RPL10LQ96L21 214 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 TMEM121Q9BTD3 319 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZDHHC18Q9NUE0 388 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 PAK5Q9P286 719 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 PHTF1Q9UMS5 762 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 PSMD3O43242 534 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 CEP104O60308 925 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 SOD1P00441 154 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ADPRHP54922 357 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 FNDC3BQ53EP0 1204 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ERN2Q76MJ5 926 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ATP11CQ8NB49 1132 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 CINPQ9BW66 212 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 GDF3Q9NR23 364 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 PLA2G4CQ9UP65 541 aa8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZFR2Q9UPR6 939 aaKnown RBP8.36□□□□□ -1.07
CDC42SE2-208ENST00000505065 A0A0J9YYE9 177 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF217O75362 1048 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TRBC1P01850 177 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 DCNP07585 359 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TPMTP51580 245 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 DSC2Q02487 901 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF284Q2VY69 593 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF449Q6P9G9 518 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 KBTBD6Q86V97 674 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCDC50Q8IVM0 306 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCHCR1Q8TD31 782 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 C1orf54Q8WWF1 131 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CPT1BQ92523 772 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 LOXL4Q96JB6 756 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 HEY1Q9Y5J3 304 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms