RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 LSM12Q3MHD2 195 aaKnown RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SLC9B1Q4ZJI4 515 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 COQ5Q5HYK3 327 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SAMD4BQ5PRF9 694 aaKnown RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 WSCD1Q658N2 575 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 FAM45BPQ6NSW5 357 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 OSTM1Q86WC4 334 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SNX32Q86XE0 403 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 CHCHD4Q8N4Q1 142 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 POU5F2Q8N7G0 328 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 PCYOX1LQ8NBM8 494 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 FBXO27Q8NI29 283 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 FAM45AQ8TCE6 357 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 TSPEARQ8WU66 669 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 RNF34Q969K3 372 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 DGCR14Q96DF8 476 aaKnown RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 C1orf74Q96LT6 269 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SERPINB11Q96P15 392 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
RFC4-214ENST00000494047 RHOBTB2Q9BYZ6 727 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 TKTL2Q9H0I9 626 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 SMOC2Q9H3U7 446 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
RFC4-214ENST00000494047 C15orf38-AP3S2A0A0A6YYH1 394 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 TYW5A2RUC4 315 aaKnown RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 YJEFN3A6XGL0 299 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 TARM1B6A8C7 271 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 IRAK2O43187 625 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SLC7A4O43246 635 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 UBTFL6P0CB48 400 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 SYN1P17600 705 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 TYMPP19971 482 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 AKAP5P24588 427 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 GSTT1P30711 240 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 MAGEA10P43363 369 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 RENBPP51606 427 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 NDST2P52849 883 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 FOXM1Q08050 763 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFC4-214ENST00000494047 PTK2BQ14289 1009 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 GRM3Q14832 879 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 ARL13AQ5H913 290 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 RALGPS1Q5JS13 557 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SYPL2Q5VXT5 272 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 CHSY3Q70JA7 882 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 HPS6Q86YV9 775 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 FSTL5Q8N475 847 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 SLC43A3Q8NBI5 491 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SMG8Q8ND04 991 aaKnown RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFC4-214ENST00000494047 ZBTB10Q96DT7 871 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 MFSD3Q96ES6 412 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 DCUN1D1Q96GG9 259 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 PCED1BQ96HM7 432 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 TUBGCP5Q96RT8 1024 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 CCT7Q99832 543 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 OSBPL11Q9BXB4 747 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 FTHL17Q9BXU8 183 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SLC25A51Q9H1U9 297 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 EBF3Q9H4W6 596 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 MEAF6Q9HAF1 191 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SPAG4Q9NPE6 437 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 XPR1Q9UBH6 696 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 DMTF1Q9Y222 760 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 RUVBL2Q9Y230 463 aaKnown RBP11.59□□□□□ -0.55
RFC4-214ENST00000494047 TRPV2Q9Y5S1 764 aa11.59□□□□□ -0.55
RFC4-214ENST00000494047 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 PRSS51A0A1B0GVH4 220 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 KANSL1LA0AUZ9 987 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 AIM2O14862 343 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 KIAA0355O15063 1070 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 GPR182O15218 404 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 ZBTB14O43829 449 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 IPO13O94829 963 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 TOP3BO95985 862 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 CLPTM1O96005 669 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 JCHAINP01591 159 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 FYNP06241 537 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 C8BP07358 591 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 LTA4HP09960 611 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 FCGR1AP12314 374 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CPB1P15086 417 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 HOXB6P17509 224 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 PEX2P28328 305 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CDC25CP30307 473 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 LEPRP48357 1165 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 NAGLUP54802 743 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 AQP4P55087 323 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 MRPS6P82932 125 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms