RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 NME1P15531 152 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CHRNA3P32297 505 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 PRCPP42785 496 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 FMO5P49326 533 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 PDX1P52945 283 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 HNRNPKP61978 463 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 YWHAZP63104 245 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 RABGAP1LQ5R372 815 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 DENND1BQ6P3S1 775 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC81Q6ZN84 652 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 EFL1Q7Z2Z2 1120 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 TMEM110Q86TL2 294 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 DCP2Q8IU60 420 aaKnown RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 TMTC1Q8IUR5 882 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 PPM1KQ8N3J5 372 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 ARFGAP2Q8N6H7 521 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 TC2NQ8N9U0 490 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 TMIEQ8NEW7 156 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 FAM174AQ8TBP5 190 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 STK32AQ8WU08 396 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 NT5C1BQ96P26 610 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 PSMB7Q99436 277 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-213ENST00000492506 IL17BQ9UHF5 180 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 TBC1D30Q9Y2I9 924 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CSNK1G3Q9Y6M4 447 aa13.38□□□□□ -0.27
HDAC3-213ENST00000492506 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 E5RJQ4 531 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 K7ERQ8 282 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 KPNA3O00505 521 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 RAD51BO15315 384 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 SMAD6O43541 496 aaKnown RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 ACADSBP45954 432 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 C5orf22Q49AR2 442 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 PERM1Q5SV97 790 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 TPRG1LQ5T0D9 272 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 KYAT3Q6YP21 454 aaKnown RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 RBM44Q6ZP01 1051 aaKnown RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF662Q6ZS27 426 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 ERN2Q76MJ5 926 aaKnown RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 PRICKLE2Q7Z3G6 844 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 ARHGEF19Q8IW93 802 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 CHST14Q8NCH0 376 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF483Q8TF39 744 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 RPRD1AQ96P16 312 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-213ENST00000492506 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 HDAC8Q9BY41 377 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 THAP9Q9H5L6 903 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 EVA1BQ9NVM1 165 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 SALL4Q9UJQ4 1053 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 VANGL2Q9ULK5 521 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 CNTN6Q9UQ52 1028 aa13.37□□□□□ -0.27
HDAC3-213ENST00000492506 CHD5Q8TDI0 1954 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TEX15Q9BXT5 2789 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TERTO14746 1132 aaKnown RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 SPINT1O43278 529 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 AHCYL1O43865 530 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 SNAP91O60641 907 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TCEA3O75764 348 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TNFSF15O95150 251 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 PCDH8O95206 1070 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TNFRSF8P28908 595 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 GCKP35557 465 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 NAP1L1P55209 391 aaKnown RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 NFATC3Q12968 1075 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 DRAP1Q14919 205 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 EMBQ6PCB8 327 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 CRTC1Q6UUV9 634 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC121Q6ZUS5 278 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 PTAR1Q7Z6K3 402 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 C14orf80Q86SX3 495 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 CCDC170Q8IYT3 715 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 MLKLQ8NB16 471 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TPCN2Q8NHX9 752 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 ENOX1Q8TC92 643 aaKnown RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 KREMEN1Q96MU8 473 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 SLC2A13Q96QE2 648 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 BOCQ9BWV1 1114 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 TRIM4Q9C037 500 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 EPN3Q9H201 632 aa13.36□□□□□ -0.27
HDAC3-213ENST00000492506 METTL14Q9HCE5 456 aaKnown RBP13.36□□□□□ -0.27
HDAC3-213ENST00000492506 NCKIPSDQ9NZQ3 722 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms