RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 HGFP14210 728 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 DESP17661 470 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 KCNA3P22001 575 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CPT2P23786 658 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TBXAS1P24557 533 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 FPR3P25089 353 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 EFNA5P52803 228 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 LIMK1P53667 647 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC12A3P55017 1021 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SATB1Q01826 763 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 GPS1Q13098 491 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TNFAIP1Q13829 316 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CAMK1Q14012 370 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CYP1B1Q16678 543 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ZNF750Q32MQ0 723 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC9B1Q4ZJI4 515 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SLC9A4Q6AI14 798 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ZCCHC12Q6PEW1 402 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 USP17L6PQ6QN14 398 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ADGRG6Q86SQ4 1221 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CAND1Q86VP6 1230 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CNGA4Q8IV77 575 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 IZUMO1Q8IYV9 350 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SFRP1Q8N474 314 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 AFAP1Q8N556 730 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TERB1Q8NA31 727 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 IL17RCQ8NAC3 791 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 C8orf58Q8NAV2 365 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 USP38Q8NB14 1042 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 DENND1AQ8TEH3 1009 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TMEM171Q8WVE6 324 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 CPT1BQ92523 772 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 N4BP2L2Q92802 583 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 EXOC4Q96A65 974 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 WBP1Q96G27 269 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 PPP1R13BQ96KQ4 1090 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ZNF48Q96MX3 618 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 SRSF8Q9BRL6 282 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 HEMGNQ9BXL5 484 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 MMADHCQ9H3L0 296 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 RABEP2Q9H5N1 569 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 ERVMER34-1Q9H9K5 563 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 RXFP3Q9NSD7 469 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 MCM9Q9NXL9 1143 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TAB2Q9NYJ8 693 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 RGS17Q9UGC6 210 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 VPS51Q9UID3 782 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 MKLN1Q9UL63 735 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 TRPV2Q9Y5S1 764 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 KCNE2Q9Y6J6 123 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 FER1L4A9Z1Z3 1794 aa3.34□□□□□ -1.87
DEPDC1-204ENST00000489862 HECW1Q76N89 1606 aa3.34□□□□□ -1.88
DEPDC1-204ENST00000489862 FAM237BA0A1B0GVD1 139 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 hCG_1809904A0A1W2PP81 198 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 A0A1W2PPE2 198 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 A0A1W2PR64 198 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 TAF4O00268 1085 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 ZSCAN9O15535 394 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 SYNCRIPO60506 623 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 TSPAN3O60637 253 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 MOSPD3O75425 235 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GGPS1O95749 300 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 TOP3BO95985 862 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 XRCC6P12956 609 aaKnown RBP eCLIP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 P4HA1P13674 534 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GAP43P17677 238 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 CD72P21854 359 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 AVPR2P30518 371 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 PPARGP37231 505 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 POLGP54098 1239 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 PRKAG1P54619 331 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 WNT3P56703 355 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 E2F1Q01094 437 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 KLHL30Q0D2K2 578 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 MGAT5BQ3V5L5 792 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 LEXMQ3ZCV2 418 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 ZRANB3Q5FWF4 1079 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 RNASE12Q5GAN4 147 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 ZNF667Q5HYK9 610 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 RAB41Q5JT25 222 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 CBWD5Q5RIA9 395 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 FRMPD1Q5SYB0 1578 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GKAP1Q5VSY0 366 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 CACHD1Q5VU97 1274 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 ISM2Q6H9L7 571 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 PIK3AP1Q6ZUJ8 805 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 CHST9Q7L1S5 443 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 AKNAQ7Z591 1439 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 MON1AQ86VX9 555 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GAS2L3Q86XJ1 694 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 SCN4BQ8IWT1 228 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GALNT16Q8N428 558 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 BPIFB1Q8TDL5 484 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 GRK7Q8WTQ7 553 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 PPP2R3CQ969Q6 453 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 SIPA1Q96FS4 1042 aa3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 ZBTB45Q96K62 511 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-204ENST00000489862 LINC00615Q96LM1 132 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms