RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 AREL1O15033 823 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 APOC2P02655 101 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 SPEM2Q0P670 501 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 WDR45BQ5MNZ6 344 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 NEK5Q6P3R8 708 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 ZSWIM9Q86XI8 627 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 RYBPQ8N488 228 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-217ENST00000488801 UBL4BQ8N7F7 174 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 OR14C36Q8NHC7 312 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 GANCQ8TET4 914 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 LRRN4Q8WUT4 740 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 RAB7BQ96AH8 199 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 KLHL32Q96NJ5 620 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 OSBPL8Q9BZF1 889 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 EBF2Q9HAK2 575 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 VPS45Q9NRW7 570 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 SEMA4GQ9NTN9 838 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 SAE1Q9UBE0 346 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-217ENST00000488801 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 FADS3Q9Y5Q0 445 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 SLCO1B1Q9Y6L6 691 aa18.86■□□□□ 0.61
PTCD3-217ENST00000488801 ARID1BQ8NFD5 2236 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-217ENST00000488801 MEI4A8MW99 385 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 HTRA2O43464 458 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-217ENST00000488801 HLA-DQB2P05538 268 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 CCNB1P14635 433 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 CCDC15Q0P6D6 951 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 ZBTB17Q13105 803 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 KLF1Q13351 362 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-217ENST00000488801 IHHQ14623 411 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 LLGL1Q15334 1064 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 MEI1Q5TIA1 1274 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 KAZNQ674X7 775 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 SLC23A3Q6PIS1 610 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 REXO1L1PQ8IX06 675 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 BBS5Q8N3I7 341 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 NSMCE1Q8WV22 266 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 SUV39H2Q9H5I1 410 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 ATP13A3Q9H7F0 1226 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 CAPN10Q9HC96 672 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 DYRK4Q9NR20 520 aa18.85■□□□□ 0.61
PTCD3-217ENST00000488801 CNOT1A5YKK6 2376 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 A0A1W2PPC4 97 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 SOCS5O75159 536 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 CD27P26842 260 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 SCNN1BP51168 640 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 SUOXP51687 545 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 MAXP61244 160 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 SYCP2LQ5T4T6 812 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 BRAT1Q6PJG6 821 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 PRR23CQ6ZRP0 262 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 BZW1Q7L1Q6 419 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 CAMK1DQ8IU85 385 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 GPR161Q8N6U8 529 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 CNTD1Q8N815 330 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 TRIM58Q8NG06 486 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 ARRDC2Q8TBH0 407 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 PIGKQ92643 395 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.611e-11■■■■■ 28.1
PTCD3-217ENST00000488801 HEMGNQ9BXL5 484 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 POLR1EQ9GZS1 481 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 NOD2Q9HC29 1040 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 NT5MQ9NPB1 228 aa18.84■□□□□ 0.61
PTCD3-217ENST00000488801 EIF2B4Q9UI10 523 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 ZFR2Q9UPR6 939 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 ZFC3H1O60293 1989 aaKnown RBP18.84■□□□□ 0.61
PTCD3-217ENST00000488801 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.61
PTCD3-217ENST00000488801 DNAH14Q0VDD8 3507 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
PTCD3-217ENST00000488801 PATE3B3GLJ2 98 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 KCNK1O00180 336 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 TIMP2P16035 220 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 MAOBP27338 520 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 SERPINA4P29622 427 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 ZNF211Q13398 564 aaPredicted RBP18.83■□□□□ 0.6
PTCD3-217ENST00000488801 XRCC4Q13426 336 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 CCDC6Q16204 474 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 TCEAL6Q6IPX3 200 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 FBXL19Q6PCT2 694 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 RABEPKQ7Z6M1 372 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 ZSCAN30Q86W11 494 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 CCNYQ8ND76 341 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 P3H4Q92791 437 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 TCEAL3Q969E4 200 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 ALS2CR12Q96Q35 445 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 SMOC1Q9H4F8 434 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.6
PTCD3-217ENST00000488801 SUSD2Q9UGT4 822 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 GGT7Q9UJ14 662 aa18.83■□□□□ 0.6
PTCD3-217ENST00000488801 TTC24A2A3L6 582 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-217ENST00000488801 UPK3BL1B0FP48 263 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 UPK3BL2E5RIL1 263 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 FZD6O60353 706 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 FOXD2O60548 495 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-217ENST00000488801 FSBPO95073 299 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 SERPINF2P08697 491 aa18.82■□□□□ 0.6
PTCD3-217ENST00000488801 NUDT1P36639 197 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms