RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PPP2CBP62714 309 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 RACK1P63244 317 aaKnown RBP15.23■□□□□ 0.03
CXCL12-207ENST00000488591 PPP2CAP67775 309 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 BCL2L1Q07817 233 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 PDK1Q15118 436 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 RSPO4Q2I0M5 234 aaPredicted RBP15.23■□□□□ 0.03
CXCL12-207ENST00000488591 BRAT1Q6PJG6 821 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 ADAT2Q7Z6V5 191 aaKnown RBP15.23■□□□□ 0.03
CXCL12-207ENST00000488591 ZSCAN30Q86W11 494 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 RNF10Q8N5U6 811 aaKnown RBP15.23■□□□□ 0.03
CXCL12-207ENST00000488591 PLD5Q8N7P1 536 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 FATE1Q969F0 183 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 SERAC1Q96JX3 654 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 GTPBP2Q9BX10 602 aaKnown RBP15.23■□□□□ 0.03
CXCL12-207ENST00000488591 ZDHHC5Q9C0B5 715 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 TM9SF3Q9HD45 589 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 TMEM9BQ9NQ34 198 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 SCUBE2Q9NQ36 999 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 DMTF1Q9Y222 760 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 FADS3Q9Y5Q0 445 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 PI4KAP42356 2102 aa15.23■□□□□ 0.03
CXCL12-207ENST00000488591 SHROOM3Q8TF72 1996 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 A0A1W2PQ67 120 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 A0A1W2PQU0 124 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 GRID2IPA4D2P6 1211 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 PPP1R12AO14974 1030 aaPredicted RBP15.22■□□□□ 0.03
CXCL12-207ENST00000488591 RGRP47804 291 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 NR2C2P49116 596 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 CSNK1EP49674 416 aaKnown RBP15.22■□□□□ 0.03
CXCL12-207ENST00000488591 COPS2P61201 443 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 POLR2LP62875 67 aaKnown RBP15.22■□□□□ 0.03
CXCL12-207ENST00000488591 DYNLT1P63172 113 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 RPS21P63220 83 aaKnown RBP15.22■□□□□ 0.03
CXCL12-207ENST00000488591 ITKQ08881 620 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 SLC10A2Q12908 348 aaPredicted RBP15.22■□□□□ 0.03
CXCL12-207ENST00000488591 TAZQ16635 292 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 RALGPS1Q5JS13 557 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 STPG1Q5TH74 334 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 KAZNQ674X7 775 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 KIAA1161Q6NSJ0 714 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 IL27RAQ6UWB1 636 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 HORMAD1Q86X24 394 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 CAMK1DQ8IU85 385 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 CCDC13Q8IYE1 715 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 TEX26Q8N6G2 289 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 UBL4BQ8N7F7 174 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 C1orf216Q8TAB5 229 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 KRT35Q92764 455 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 BRD8Q9H0E9 1235 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 AASDHPPTQ9NRN7 309 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 TRIM10Q9UDY6 481 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
CXCL12-207ENST00000488591 C10orf142B7Z368 130 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 PRAMEF26H0Y7S4 382 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 MUSKO15146 869 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CST8O60676 142 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CCDC175P0C221 793 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 KRT10P13645 584 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CCNB1P14635 433 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 TIMP2P16035 220 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CES1P23141 567 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CTNNA2P26232 953 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 CD38P28907 300 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 GRIA4P48058 902 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 RWDD2BP57060 319 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 C21orf59P57076 290 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 ELP6Q0PNE2 266 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 SGCGQ13326 291 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 STAT4Q14765 748 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 ERAP2Q6P179 960 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 LRRC57Q8N9N7 239 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 MAML1Q92585 1016 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 P3H4Q92791 437 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 MGME1Q9BQP7 344 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 ORAI3Q9BRQ5 295 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 POLR1EQ9GZS1 481 aaKnown RBP15.21■□□□□ 0.03
CXCL12-207ENST00000488591 EBF2Q9HAK2 575 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 NT5MQ9NPB1 228 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 FSCN3Q9NQT6 498 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 RXFP3Q9NSD7 469 aa15.21■□□□□ 0.03
CXCL12-207ENST00000488591 RBM22Q9NW64 420 aaKnown RBP eCLIP15.21■□□□□ 0.03
CXCL12-207ENST00000488591 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 TSPAN11A1L157 253 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 C4orf47A7E2U8 309 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 MIF4GDA9UHW6 222 aaKnown RBP15.2■□□□□ 0.02
CXCL12-207ENST00000488591 SLC30A4O14863 429 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 VILLO15195 856 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 CR2P20023 1033 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 TGM2P21980 687 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 NFKBIAP25963 317 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 AKT2P31751 481 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 ABL2P42684 1182 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 ID4P47928 161 aa15.2■□□□□ 0.02
CXCL12-207ENST00000488591 MARCKSL1P49006 195 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms