RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GIMAP7Q8NHV1 300 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 PRCCQ92733 491 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-209ENST00000486618 NXPE2Q96DL1 559 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 ERLEC1Q96DZ1 483 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 CLIP3Q96DZ5 547 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 SIPA1Q96FS4 1042 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 STRA6Q9BX79 667 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 ZNF518BQ9C0D4 1074 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 IKZF4Q9H2S9 585 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 PRORYQ9H606 182 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 USP36Q9P275 1121 aaKnown RBP7.01□□□□□ -1.29
HDAC3-209ENST00000486618 EIF2B4Q9UI10 523 aaKnown RBP7.01□□□□□ -1.29
HDAC3-209ENST00000486618 CRYL1Q9Y2S2 319 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 GPR52Q9Y2T5 361 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 RAI2Q9Y5P3 530 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 STON1Q9Y6Q2 735 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 NUMA1Q14980 2115 aa7.01□□□□□ -1.29
HDAC3-209ENST00000486618 MYO18BQ8IUG5 2567 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TEX51A0A1B0GUA7 166 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 A0A1B0GVT2 93 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 FAM149AA5PLN7 773 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 A8MXQ7 604 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 WASH3PC4AMC7 463 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 M0R3H8 397 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 MCF2LO15068 1137 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 P4HA2O15460 535 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 PCDHGA12O60330 932 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 DFNA5O60443 496 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 SYNCRIPO60506 623 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 TSC22D2O75157 780 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 CPP00450 1065 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 JUPP14923 745 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 ADMP35318 185 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 KRT9P35527 623 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 ATP5C1P36542 298 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 EIF2S3P41091 472 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 CSNK1EP49674 416 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 TPMTP51580 245 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 GP2P55259 537 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 POLR2FP61218 127 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 TNNC1P63316 161 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 IRX1P78414 480 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 ASIC2Q16515 512 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 FUT11Q495W5 492 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 SCARA3Q6AZY7 606 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 OLFML1Q6UWY5 402 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TPGS1Q6ZTW0 290 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 STXBP4Q6ZWJ1 553 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 ENOSF1Q7L5Y1 443 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 GPR155Q7Z3F1 870 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TMPRSS6Q8IU80 811 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 WDR49Q8IV35 697 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 OR5B17Q8NGF7 314 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 FBXO30Q8TB52 745 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 COG8Q96MW5 612 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 FCRL3Q96P31 734 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 NAP1L3Q99457 506 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 CBWD1Q9BRT8 395 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 DESI2Q9BSY9 194 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 MED10Q9BTT4 135 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 B3GNT5Q9BYG0 378 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 MYLK2Q9H1R3 596 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 CCDC68Q9H2F9 335 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 SEMA6CQ9H3T2 930 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 FBXO44Q9H4M3 255 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 PCIF1Q9H4Z3 704 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 ACSS3Q9H6R3 686 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 UPF2Q9HAU5 1272 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 GRPEL1Q9HAV7 217 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 DMAP1Q9NPF5 467 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 CD93Q9NPY3 652 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TLR8Q9NR97 1041 aaKnown RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 OLFML3Q9NRN5 406 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 NSMCE4AQ9NXX6 385 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 IL20Q9NYY1 176 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 IL37Q9NZH6 218 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TBC1D7Q9P0N9 293 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 THAP10Q9P2Z0 257 aaPredicted RBP7□□□□□ -1.29
HDAC3-209ENST00000486618 FTSJ1Q9UET6 329 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 CCDC39Q9UFE4 941 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 PFDN2Q9UHV9 154 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 MAPK8IP1Q9UQF2 711 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TMEM98Q9Y2Y6 226 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 PCDHGA1Q9Y5H4 931 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 LAMA5O15230 3695 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 WDFY3Q8IZQ1 3526 aa7□□□□□ -1.29
HDAC3-209ENST00000486618 TMEM131Q92545 1883 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-209ENST00000486618 FAM92AA1XBS5 289 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 KCNJ18B7U540 433 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 H7C0S8 307 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 J3QKU1 62 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 KIF2AO00139 706 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-209ENST00000486618 PLK4O00444 970 aa6.99□□□□□ -1.29
HDAC3-209ENST00000486618 CLDN5O00501 218 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms