RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 GLDCP23378 1020 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 NTSR1P30989 418 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 CD86P42081 329 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 CSNK1DP48730 415 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ARL4CP56559 192 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 MAXP61244 160 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ARF5P84085 180 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 CDK16Q00536 496 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 SLC7A5Q01650 507 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 MPP3Q13368 585 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 CUL1Q13616 776 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ELAVL3Q14576 367 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 PCSK7Q16549 785 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 MYLK3Q32MK0 819 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 C2orf27AQ580R0 203 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 DNAJC21Q5F1R6 531 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 TMEM196Q5HYL7 178 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 IZUMO3Q5VZ72 239 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TTC27Q6P3X3 843 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ZC3H14Q6PJT7 736 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 Q6ZVU0 165 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 SRLQ86TD4 932 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TP53INP2Q8IXH6 220 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 PLPP6Q8IY26 295 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TAB3Q8N5C8 712 aaPredicted RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 DTWD2Q8NBA8 298 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TSEN2Q8NCE0 465 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 GABPB2Q8TAK5 448 aaPredicted RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 LRRN4Q8WUT4 740 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 SORCS1Q8WY21 1168 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 RTP4Q96DX8 246 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ALG14Q96F25 216 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 LRIG1Q96JA1 1093 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 FCRL5Q96RD9 977 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 NUDCD1Q96RS6 583 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TUBGCP5Q96RT8 1024 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 RBM15Q96T37 977 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBR4-214ENST00000486515 SEMA3CQ99985 751 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 MGME1Q9BQP7 344 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 HEPHQ9BQS7 1158 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 HERPUD2Q9BSE4 406 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 TNKS2Q9H2K2 1166 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 DPH5Q9H2P9 285 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 PDFQ9HBH1 243 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 RRAGDQ9NQL2 400 aaPredicted RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 IL36AQ9UHA7 158 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 INTS6Q9UL03 887 aaKnown RBP7.04□□□□□ -1.28
UBR4-214ENST00000486515 NCKAP1Q9Y2A7 1128 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 STARD13Q9Y3M8 1113 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 OR51B4Q9Y5P0 310 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 ITPR1Q14643 2758 aa7.04□□□□□ -1.28
UBR4-214ENST00000486515 NOTCH4Q99466 2003 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 DENND4AQ7Z401 1863 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 FAM170BA6NMN3 283 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 TTC34A8MYJ7 566 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 F5H423 210 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 NEMP1O14524 444 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 DNALI1O14645 258 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 TRIM24O15164 1050 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ALOX15BO15296 676 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 RNF40O75150 1001 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 PMPCBO75439 489 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ZMPSTE24O75844 475 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 KLF8O95600 359 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 IL1BP01584 269 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 DNTTP04053 509 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 HLA-DQB2P05538 268 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ZSCAN5DPP0CG00 497 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ETS1P14921 441 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 VAV1P15498 845 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 PSMB4P28070 264 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 RPL22P35268 128 aaKnown RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 CTSOP43234 321 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 MAGEA9P43362 315 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 STK19P49842 368 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 CCNHP51946 323 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 DRG2P55039 364 aaKnown RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 PLTPP55058 493 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 GDF10P55107 478 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 DSC2Q02487 901 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 CDK18Q07002 472 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 WASHC5Q12768 1159 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ZBTB17Q13105 803 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 MORF4L2Q15014 288 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 CYTH1Q15438 398 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 SLC14A2Q15849 920 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 HNRNPA1L2Q32P51 320 aaKnown RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 TTC31Q49AM3 519 aaPredicted RBP7.03□□□□□ -1.28
UBR4-214ENST00000486515 ARMC12Q5T9G4 340 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 ERAP2Q6P179 960 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 CASC4Q6P4E1 433 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 GDPD4Q6W3E5 623 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 CENPUQ71F23 418 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 KDELC2Q7Z4H8 507 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 PDIK1LQ8N165 341 aa7.03□□□□□ -1.28
UBR4-214ENST00000486515 PGBD3Q8N328 593 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms