RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MMRN1Q13201 1228 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 DNAJC3Q13217 504 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 TRIM14Q14142 442 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 DPYSL2Q16555 572 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 HADHQ16836 314 aaKnown RBP17.86■□□□□ 0.45
COL6A1-204ENST00000486023 ATP13A4Q4VNC1 1196 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 TMCO3Q6UWJ1 677 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 KDM7AQ6ZMT4 941 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 GCNT7Q6ZNI0 430 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 POLNQ7Z5Q5 900 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 SRLQ86TD4 932 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 CAMK1DQ8IU85 385 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 BAHD1Q8TBE0 780 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-204ENST00000486023 VOPP1Q96AW1 172 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 CNDP2Q96KP4 475 aaKnown RBP17.86■□□□□ 0.45
COL6A1-204ENST00000486023 BMFQ96LC9 184 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 CSPG4P5Q96PW8 444 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 CHP1Q99653 195 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 ERVMER34-1Q9H9K5 563 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 PCDH18Q9HCL0 1135 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 KLHL11Q9NVR0 708 aa17.86■□□□□ 0.45
COL6A1-204ENST00000486023 BUB1BO60566 1050 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-204ENST00000486023 CD48P09326 243 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 H2AFZP0C0S5 128 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 SCNN1BP51168 640 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 ZNF135P52742 658 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-204ENST00000486023 IL10RBQ08334 325 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 SLC18A3Q16572 532 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 AFMIDQ63HM1 303 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 UNQ6494/PRO21346Q6UXR6 183 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 H2AFVQ71UI9 128 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 RAB44Q7Z6P3 723 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-204ENST00000486023 GLRX5Q86SX6 157 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 MARCH9Q86YJ5 346 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 LZTR1Q8N653 840 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 ADAMTS14Q8WXS8 1223 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 CCDC42Q96M95 316 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 DNAJC7Q99615 494 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 CPEB1Q9BZB8 566 aaKnown RBP17.85■□□□□ 0.45
COL6A1-204ENST00000486023 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 DNAJC28Q9NX36 388 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 NEUROG3Q9Y4Z2 214 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 HS3ST3A1Q9Y663 406 aa17.85■□□□□ 0.45
COL6A1-204ENST00000486023 A6NNZ2 444 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 ENC1O14682 589 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 YKT6O15498 198 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 FFAR2O15552 330 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 SPINT1O43278 529 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 TM7SF2O76062 418 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 HNRNPH3P31942 346 aaKnown RBP17.84■□□□□ 0.45
COL6A1-204ENST00000486023 RXRGP48443 463 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 SLC25A11Q02978 314 aaKnown RBP17.84■□□□□ 0.45
COL6A1-204ENST00000486023 SLC10A7Q0GE19 358 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 ZNF235Q14590 738 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 SLC22A18ASQ8N1D0 253 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 KCTD6Q8NC69 237 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 TEKT4Q8WW24 435 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 C1QTNF2Q9BXJ5 285 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 TRIM5Q9C035 493 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 NHEJ1Q9H9Q4 299 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-204ENST00000486023 TOR4AQ9NXH8 423 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 COQ6Q9Y2Z9 468 aa17.84■□□□□ 0.45
COL6A1-204ENST00000486023 FRYQ5TBA9 3013 aa17.83■□□□□ 0.45
COL6A1-204ENST00000486023 A8MX80 341 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 AREL1O15033 823 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 MUSKO15146 869 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 MFAP3LO75121 409 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 SERPINA4P29622 427 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 BCL2L1Q07817 233 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 PDE1CQ14123 709 aaPredicted RBP17.83■□□□□ 0.44
COL6A1-204ENST00000486023 MESDQ14696 234 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 LBRQ14739 615 aaKnown RBP17.83■□□□□ 0.44
COL6A1-204ENST00000486023 UGP2Q16851 508 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 DHRS13Q6UX07 377 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 ABI3BPQ7Z7G0 1075 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 ATPAF2Q8N5M1 289 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL6A1-204ENST00000486023 NSMCE1Q8WV22 266 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 ATP13A3Q9H7F0 1226 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 PCDH12Q9NPG4 1184 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 UCKL1Q9NWZ5 548 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 DKK3Q9UBP4 350 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 SEPT3Q9UH03 358 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 MSRB2Q9Y3D2 182 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 TMEM131Q92545 1883 aa17.83■□□□□ 0.44
COL6A1-204ENST00000486023 CABIN1Q9Y6J0 2220 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 EPG5Q9HCE0 2579 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 FAM149AA5PLN7 773 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 AKR1B15C9JRZ8 316 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-204ENST00000486023 LZTS3O60299 673 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-204ENST00000486023 PROSCO94903 275 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 MAP3K6O95382 1288 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 TNNT1P13805 278 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 TAS2R40P59535 323 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 ITKQ08881 620 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 RFTN1Q14699 578 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-204ENST00000486023 GRM3Q14832 879 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 HS1BP3Q53T59 392 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms