RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HMCESQ96FZ2 354 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 LRIG1Q96JA1 1093 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SPACA7Q96KW9 195 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 PANX2Q96RD6 677 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 NUP85Q9BW27 656 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 HDAC8Q9BY41 377 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CPEB1Q9BZB8 566 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 PHACTR1Q9C0D0 580 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 BRD8Q9H0E9 1235 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 NEUROG2Q9H2A3 272 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 TNKS2Q9H2K2 1166 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 IL21RQ9HBE5 538 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 GPAMQ9HCL2 828 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 SEPT11Q9NVA2 429 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 DONSONQ9NYP3 566 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 IP6K2Q9UHH9 426 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 LCMT1Q9UIC8 334 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 VPS28Q9UK41 221 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 RAB23Q9ULC3 237 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 AP4E1Q9UPM8 1137 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ITM2BQ9Y287 266 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 CA5BQ9Y2D0 317 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.82□□□□□ -1.48
CUX1-208ENST00000485792 PCM1Q15154 2024 aa5.82□□□□□ -1.48
CUX1-208ENST00000485792 ACACAQ13085 2346 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 A0A0A6YYK5 440 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 A0A0U1RQS6 177 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 A0A1W2PR77 199 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 MED19A0JLT2 244 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 TSPAN11A1L157 253 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 BTNL10A8MVZ5 291 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 RASA4BC9J798 803 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 J3KR12 359 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 MYO1FO00160 1098 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 AREL1O15033 823 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 PJA2O43164 708 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 RASA4O43374 803 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 AP1G1O43747 822 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 PRAMEF11O60813 436 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 RAMP2O60895 175 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 RNF8O76064 485 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 MAP3K6O95382 1288 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 GSRP00390 522 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ZNF883P0CG24 379 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ERCC2P18074 760 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CR2P20023 1033 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 EPHB2P29323 1055 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CDC25BP30305 580 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CHRNA3P32297 505 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 NNMTP40261 264 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ADPRHP54922 357 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 FAM193AP78312 1265 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 IRX4P78413 519 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 RPL6Q02878 288 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 NSUN2Q08J23 767 aaKnown RBP eCLIP5.81□□□□□ -1.48
CUX1-208ENST00000485792 SLC10A2Q12908 348 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 POLD3Q15054 466 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 PAFAH1B3Q15102 231 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 CYTH1Q15438 398 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 DUOXA1Q1HG43 343 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 TDRD12Q587J7 1177 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 LRRC73Q5JTD7 316 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 LRRC38Q5VT99 294 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ALG1LQ6GMV1 187 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 NEK5Q6P3R8 708 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 DPY19L3Q6ZPD9 716 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 PARS2Q7L3T8 475 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 RABEPKQ7Z6M1 372 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 PIP4P1Q86T03 277 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 TRIM69Q86WT6 500 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 MMAAQ8IVH4 418 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 CCDC117Q8IWD4 279 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 ALDH16A1Q8IZ83 802 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CBARPQ8N350 705 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 TEX26Q8N6G2 289 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ACRBPQ8NEB7 543 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 OR2T34Q8NGX1 318 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CEP76Q8TAP6 659 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 SLC35G2Q8TBE7 412 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ZNF564Q8TBZ8 553 aaPredicted RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 NETO1Q8TDF5 533 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ASB12Q8WXK4 309 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 BIRC7Q96CA5 298 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ECHDC3Q96DC8 303 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CELF6Q96J87 481 aaKnown RBP5.81□□□□□ -1.48
CUX1-208ENST00000485792 TSGA13Q96PP4 275 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 GORASP1Q9BQQ3 440 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 GPR174Q9BXC1 333 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 SLC39A8Q9C0K1 460 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 LACRTQ9GZZ8 138 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 MUC3BQ9H195 1237 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 CATSPERBQ9H7T0 1116 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 ATP13A1Q9HD20 1204 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 FBXL12Q9NXK8 326 aa5.81□□□□□ -1.48
CUX1-208ENST00000485792 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms