RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 KRT71Q3SY84 523 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 C8orf82Q6P1X6 216 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-213ENST00000483684 PATL1Q86TB9 770 aaKnown RBP4.33□□□□□ -1.72
COMMD3-213ENST00000483684 CHD1LQ86WJ1 897 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 CERS3Q8IU89 383 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 MCPH1Q8NEM0 835 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 SH3KBP1Q96B97 665 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 RNF183Q96D59 192 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 SLC32A1Q9H598 525 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 EPHX3Q9H6B9 360 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 ALKBH4Q9NXW9 302 aa4.33□□□□□ -1.72
COMMD3-213ENST00000483684 IFT80Q9P2H3 777 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-213ENST00000483684 IGHV4-28A0A0C4DH34 117 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 EIF3FO00303 357 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CHL1O00533 1208 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 PER2O15055 1255 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CEP104O60308 925 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 TSPAN3O60637 253 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CENPAP49450 140 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 EEF1A2Q05639 463 aaKnown RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 FAM27E3Q08E93 113 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 TBL3Q12788 808 aaKnown RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 TRAF3Q13114 568 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 LPIN1Q14693 890 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 NAA25Q14CX7 972 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 PLCB4Q15147 1175 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 ZNF718Q3SXZ3 478 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 MAP3K21Q5TCX8 1036 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 IL20RBQ6UXL0 311 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 PRSS45Q7RTY3 260 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 MON1AQ86VX9 555 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CPOQ8IVL8 374 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 MUC20Q8N307 709 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CLIP4Q8N3C7 705 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 YME1L1Q96TA2 773 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CD180Q99467 661 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 TAOK3Q9H2K8 898 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 CLK4Q9HAZ1 481 aaKnown RBP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 RIC8AQ9NPQ8 531 aa4.32□□□□□ -1.72
COMMD3-213ENST00000483684 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.32□□□□□ -1.72
COMMD3-213ENST00000483684 ADGRF5Q8IZF2 1346 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 C17orf113A0A1B0GUU1 675 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 DENND3A2RUS2 1198 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 LINC01553A4QN01 128 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 ZBTB11O95625 1053 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 FCGR1AP12314 374 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 TTKP33981 857 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 SEC61A1P61619 476 aaKnown RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 BBS12Q6ZW61 710 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 MOB3CQ70IA8 216 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 LURAP1LQ8IV03 231 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 ANKRD18AQ8IVF6 992 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 DENND6AQ8IWF6 608 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 CPXM2Q8N436 756 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 LSM14AQ8ND56 463 aaKnown RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 ZMIZ2Q8NF64 920 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 TMEM170AQ8WVE7 144 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 TMED6Q8WW62 240 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 TXNDC15Q96J42 360 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 PHF7Q9BWX1 381 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 SPATS2LQ9NUQ6 558 aaKnown RBP4.31□□□□□ -1.72
COMMD3-213ENST00000483684 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
COMMD3-213ENST00000483684 PLEKHD1A6NEE1 506 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 SLC16A5O15375 505 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 KCNJ13O60928 360 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 KRT36O76013 467 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 ZNF12P17014 697 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 C21orf33P30042 268 aaPredicted RBP4.3□□□□□ -1.72
COMMD3-213ENST00000483684 LIFRP42702 1097 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 MXI1P50539 228 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 CCR5P51681 352 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 CLCN5P51795 746 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 CYP4A11Q02928 519 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 POU3F1Q03052 451 aaPredicted RBP4.3□□□□□ -1.72
COMMD3-213ENST00000483684 UBE3AQ05086 875 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 TRAF2Q12933 501 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 HLFQ16534 295 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 EDRF1Q3B7T1 1238 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
COMMD3-213ENST00000483684 WDR45BQ5MNZ6 344 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 ATG16L1Q676U5 607 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 WBP2NLQ6ICG8 309 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 ADGRG6Q86SQ4 1221 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 MB21D2Q8IYB1 491 aaPredicted RBP4.3□□□□□ -1.72
COMMD3-213ENST00000483684 RFWD2Q8NHY2 731 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 HERVK_113Q902F9 699 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 GCC1Q96CN9 775 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 SCLT1Q96NL6 688 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 EYA3Q99504 573 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 SLC25A33Q9BSK2 321 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 SPRY4Q9C004 299 aa4.3□□□□□ -1.72
COMMD3-213ENST00000483684 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms