RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MGME1Q9BQP7 344 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 GTPBP2Q9BX10 602 aaKnown RBP18.21■□□□□ 0.51
HDAC6-225ENST00000483506 LACRTQ9GZZ8 138 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 SUV39H2Q9H5I1 410 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 ANKRD6Q9Y2G4 727 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 HYOU1Q9Y4L1 999 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 PRAMEF26H0Y7S4 382 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 WNT9AO14904 365 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 PIGNO95427 931 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 CER1O95813 267 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 WNT1P04628 370 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 ZNF883P0CG24 379 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 MX2P20592 715 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 CCNCP24863 283 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 CD38P28907 300 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 MAT2AP31153 395 aaKnown RBP18.2■□□□□ 0.5
HDAC6-225ENST00000483506 CTSKP43235 329 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 RPS21P63220 83 aaKnown RBP18.2■□□□□ 0.5
HDAC6-225ENST00000483506 GBE1Q04446 702 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 SLC10A2Q12908 348 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-225ENST00000483506 SLC14A1Q13336 389 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 HNRNPDQ14103 355 aaKnown RBP18.2■□□□□ 0.5
HDAC6-225ENST00000483506 IFI16Q16666 785 aaKnown RBP18.2■□□□□ 0.5
HDAC6-225ENST00000483506 KIF19Q2TAC6 998 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 RALGPS1Q5JS13 557 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 BRAT1Q6PJG6 821 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 ERMP1Q7Z2K6 904 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 DGLUCYQ7Z3D6 616 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 IQCHQ86VS3 1027 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 KATNAL2Q8IYT4 538 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 HDAC11Q96DB2 347 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 ECHDC3Q96DC8 303 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 FEM1CQ96JP0 617 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 GOLPH3Q9H4A6 298 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 ATP13A3Q9H7F0 1226 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 DTLQ9NZJ0 730 aa18.2■□□□□ 0.5
HDAC6-225ENST00000483506 TRAFD1O14545 582 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-225ENST00000483506 OPHN1O60890 802 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 PCDH8O95206 1070 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 TIMP2P16035 220 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 ZFXP17010 805 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-225ENST00000483506 SERPINA4P29622 427 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 OVGP1Q12889 678 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 ZNF235Q14590 738 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 MARC1Q5VT66 337 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 SEL1L3Q68CR1 1132 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 ALG1LQ6GMV1 187 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 TIGD7Q6NT04 549 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-225ENST00000483506 BBS5Q8N3I7 341 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 TXLNBQ8N3L3 684 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 PGBD5Q8N414 524 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 MFSD2AQ8NA29 543 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 NSMCE1Q8WV22 266 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 ASB12Q8WXK4 309 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 SKA1Q96BD8 255 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 NSMCE3Q96MG7 304 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 NUDCD1Q96RS6 583 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 AMACRQ9UHK6 382 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 SNX11Q9Y5W9 270 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 DUSP10Q9Y6W6 482 aa18.19■□□□□ 0.5
HDAC6-225ENST00000483506 TMEM131Q92545 1883 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 CABIN1Q9Y6J0 2220 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 DCDC2BA2VCK2 349 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 MATN3O15232 486 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 CDKN2BP42772 138 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 MMP13P45452 471 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 FGL2Q14314 439 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 ZNF423Q2M1K9 1284 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 HLA-BQ31612 363 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 LAYNQ6UX15 382 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 DAAM2Q86T65 1068 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 TTC7BQ86TV6 843 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 CAMK1DQ8IU85 385 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 LRRC57Q8N9N7 239 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 OR2I1PQ8NGU4 316 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 OLFM3Q96PB7 478 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 C1QTNF2Q9BXJ5 285 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 AASDHPPTQ9NRN7 309 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 GGT7Q9UJ14 662 aa18.18■□□□□ 0.5
HDAC6-225ENST00000483506 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 APOL1O14791 398 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 HTRA2O43464 458 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 SOCS5O75159 536 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 MAP3K6O95382 1288 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 CSRP1P21291 193 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 HNRNPA2B1P22626 353 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 SCNN1BP51168 640 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 C21orf59P57076 290 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 BCL2L1Q07817 233 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 PPIDQ08752 370 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 ELP6Q0PNE2 266 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 UGP2Q16851 508 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 TMEM52BQ4KMG9 183 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
HDAC6-225ENST00000483506 PIP4P1Q86T03 277 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 KIAA1328Q86T90 577 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 ZSWIM9Q86XI8 627 aa18.17■□□□□ 0.5
HDAC6-225ENST00000483506 FAM174AQ8TBP5 190 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms