RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
USP39-215ENST00000481409 PYROXD1Q8WU10 500 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 ATXN2LQ8WWM7 1075 aaKnown RBP10.27□□□□□ -0.77
USP39-215ENST00000481409 MYO19Q96H55 970 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 RPL10LQ96L21 214 aaKnown RBP10.27□□□□□ -0.77
USP39-215ENST00000481409 HINFPQ9BQA5 517 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 HEPHQ9BQS7 1158 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
USP39-215ENST00000481409 FUT8Q9BYC5 575 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 TMEM245Q9H330 911 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 ACBD3Q9H3P7 528 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 NOD2Q9HC29 1040 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 SAMD15Q9P1V8 674 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 RIMKLBQ9ULI2 386 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 SORCS3Q9UPU3 1222 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 TEX264Q9Y6I9 313 aa10.27□□□□□ -0.77
USP39-215ENST00000481409 HEATR9A2RTY3 570 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 PRRT4C9JH25 899 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SMAD6O43541 496 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 FZD6O60353 706 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 PMPCBO75439 489 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ZNF821O75541 412 aaPredicted RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 PAPSS2O95340 614 aaPredicted RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 PRNPP04156 253 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 NUDT17P0C025 328 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 FAM153BP0C7A2 387 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 IL9P15248 144 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ADRA1DP25100 572 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 CTSOP43234 321 aaPredicted RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 GRIA4P48058 902 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 CCNHP51946 323 aaPredicted RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 KDSRQ06136 332 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 CCDC15Q0P6D6 951 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ELAVL3Q14576 367 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 ZNF234Q14588 700 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 FAM153CQ494X1 144 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ACCSLQ4AC99 568 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 FNDC3BQ53EP0 1204 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 PCID2Q5JVF3 399 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 DGKKQ5KSL6 1271 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ARMC12Q5T9G4 340 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SDE2Q6IQ49 451 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 BRAT1Q6PJG6 821 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 CCDC25Q86WR0 208 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 RAVER1Q8IY67 606 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 UBALD2Q8IYN6 164 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ZBED8Q8IZ13 594 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SYNPOQ8N3V7 929 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 TMIEQ8NEW7 156 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 IPMKQ8NFU5 416 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 OR2A12Q8NGT7 310 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 ECHDC3Q96DC8 303 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 CHFRQ96EP1 664 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SHDQ96IW2 340 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SIGLEC10Q96LC7 697 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 TRIB3Q96RU7 358 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 EBNA1BP2Q99848 306 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 CCDC77Q9BR77 488 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 FICDQ9BVA6 458 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 TRABDQ9H4I3 376 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 SAYSD1Q9NPB0 183 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 HECAQ9UBI9 543 aaPredicted RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 DKK3Q9UBP4 350 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 WNT16Q9UBV4 365 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 FETUBQ9UGM5 382 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 MRPS17Q9Y2R5 130 aaKnown RBP10.26□□□□□ -0.77
USP39-215ENST00000481409 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 RAI2Q9Y5P3 530 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 PIAS3Q9Y6X2 628 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 MIA3Q5JRA6 1907 aa10.26□□□□□ -0.77
USP39-215ENST00000481409 MUC22E2RYF6 1773 aaPredicted RBP10.25□□□□□ -0.77
USP39-215ENST00000481409 FAM237BA0A1B0GVD1 139 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 GOLGA8MH3BSY2 632 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 K7ERQ8 282 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 TRAFD1O14545 582 aaPredicted RBP10.25□□□□□ -0.77
USP39-215ENST00000481409 USP1O94782 785 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 PGLSO95336 258 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 CRTAMO95727 393 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 CPP00450 1065 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 POLBP06746 335 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 C7P10643 843 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 PGAM1P18669 254 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 PAMP19021 973 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 SP100P23497 879 aaPredicted RBP10.25□□□□□ -0.77
USP39-215ENST00000481409 STX2P32856 288 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 RGRP47804 291 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 STK19P49842 368 aaPredicted RBP10.25□□□□□ -0.77
USP39-215ENST00000481409 ZP2Q05996 745 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 BBS9Q3SYG4 887 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 SLC44A4Q53GD3 710 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 SPANXN3Q5MJ09 141 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 FNBP1LQ5T0N5 605 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 DENND2CQ68D51 928 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 DENND5AQ6IQ26 1287 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 LRIG3Q6UXM1 1119 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 SERPINA13PQ6UXR4 307 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 TMEM135Q86UB9 458 aa10.25□□□□□ -0.77
USP39-215ENST00000481409 TAB3Q8N5C8 712 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms