RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 HSF1Q00613 529 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 TNFAIP1Q13829 316 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 PPP2R5BQ15173 497 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 KRT24Q2M2I5 525 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 TMEM266Q2M3C6 531 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 PCGF3Q3KNV8 242 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 BMP2KLQ5H9B9 411 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 FBXO42Q6P3S6 717 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 AAGABQ6PD74 315 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 ZNF813Q6ZN06 617 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 CYB5R4Q7L1T6 521 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 UBE2Q1Q7Z7E8 422 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 IGFN1Q86VF2 1251 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 DHX40Q8IX18 779 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 ZDHHC23Q8IYP9 409 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 KCTD6Q8NC69 237 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 SNAPC3Q92966 411 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 PABPC5Q96DU9 382 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 PIMREGQ9BSJ6 248 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 RABEP2Q9H5N1 569 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 MOV10Q9HCE1 1003 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 SLC35C2Q9NQQ7 365 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 WSB2Q9NYS7 404 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 SEC63Q9UGP8 760 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 IPO11Q9UI26 975 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 ZHX1Q9UKY1 873 aaPredicted RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 AAR2Q9Y312 384 aaKnown RBP5.37□□□□□ -1.55
UPF3B-203ENST00000478840 FAM96BQ9Y3D0 163 aa5.37□□□□□ -1.55
UPF3B-203ENST00000478840 FAM170AA1A519 330 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 C17orf102A2RUQ5 167 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 SNAP23O00161 211 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 TMCC1O94876 653 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PCNAP12004 261 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 INSRRP14616 1297 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 CTPS1P17812 591 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 GPD1P21695 349 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PLA2G5P39877 138 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 BUD31P41223 144 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 GPR12P47775 334 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 NRIP1P48552 1158 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PMS2P54278 862 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 KRT83P78385 493 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 ZBED6P86452 979 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 AIMP1Q12904 312 aaKnown RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 BAATQ14032 418 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PROSER3Q2NL68 480 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 EARS2Q5JPH6 523 aaKnown RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PMS2CLQ68D20 193 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 KIAA0930Q6ICG6 404 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 SPRED1Q7Z699 444 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 CCDC25Q86WR0 208 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 LINC00346Q8IVM7 164 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 TEX11Q8IYF3 940 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 KIAA2013Q8IYS2 634 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 IL17RCQ8NAC3 791 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 MCPH1Q8NEM0 835 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 OR2A14Q96R47 310 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 BBS4Q96RK4 519 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 PRRX2Q99811 253 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 MRPL1Q9BYD6 325 aaKnown RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 KIF9Q9HAQ2 790 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 CPNE5Q9HCH3 593 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 CCDC177Q9NQR7 707 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 RNF146Q9NTX7 359 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 OGFRQ9NZT2 677 aa5.36□□□□□ -1.55
UPF3B-203ENST00000478840 CNOT8Q9UFF9 292 aaKnown RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 ZNF644Q9H582 1327 aaPredicted RBP5.36□□□□□ -1.55
UPF3B-203ENST00000478840 ZNF335Q9H4Z2 1342 aaPredicted RBP5.35□□□□□ -1.55
UPF3B-203ENST00000478840 A0A0U1RQF3 1178 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 FAM237AA0A1B0GTK4 181 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 TMEM191CA6NGB0 347 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 FOXO6A8MYZ6 492 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 B8ZZF3 427 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 CTDSP2O14595 271 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 PAPSS1O43252 624 aaPredicted RBP5.35□□□□□ -1.55
UPF3B-203ENST00000478840 TBX10O75333 385 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 SLC25A12O75746 678 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 RNF8O76064 485 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 TUBBP07437 444 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 CD63P08962 238 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
UPF3B-203ENST00000478840 SRD5A1P18405 259 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 KRT4P19013 534 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 SLC16A2P36021 539 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 TERF1P54274 439 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 RRP1P56182 461 aaKnown RBP5.35□□□□□ -1.55
UPF3B-203ENST00000478840 YPEL5P62699 121 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 DRAP1Q14919 205 aaPredicted RBP5.35□□□□□ -1.55
UPF3B-203ENST00000478840 ADIPOQQ15848 244 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 TCP11X2Q5H9J9 407 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 HECTD3Q5T447 861 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 ISM2Q6H9L7 571 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 CFAP77Q6ZQR2 320 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 VSIG1Q86XK7 387 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 DNAAF5Q86Y56 855 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
UPF3B-203ENST00000478840 RNF168Q8IYW5 571 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms