RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SLC32A1Q9H598 525 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 MRPL44Q9H9J2 332 aaKnown RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 OSER1Q9NX31 292 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 BCCIPQ9P287 314 aaKnown RBP eCLIP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 FBXO2Q9UK22 296 aaPredicted RBP4.83□□□□□ -1.64
CKS1B-207ENST00000477676 OAZ3Q9UMX2 235 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 BTBD3Q9Y2F9 522 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 NBASA2RRP1 2371 aa4.83□□□□□ -1.64
CKS1B-207ENST00000477676 UBR5O95071 2799 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 FAM92AA1XBS5 289 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TBC1D3BA6NDS4 549 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 H0Y626 953 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 SLC9A3R1O14745 358 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 MDM4O15151 490 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TGFB1I1O43294 461 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 AP5Z1O43299 807 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CACNG3O60359 315 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TACC1O75410 805 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 C1QL1O75973 258 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TRIM16O95361 564 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GCNT3O95395 438 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PRB1P04280 392 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 C1SP09871 688 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TMEM191BP0C7N4 346 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 IRF1P10914 325 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PABPC1P11940 636 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 ACO1P21399 889 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 YWHAQP27348 245 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GNL1P36915 607 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CASP4P49662 377 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 MEOX1P50221 254 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GAD2Q05329 585 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GFPT1Q06210 699 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 DBPQ10586 325 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PAK1Q13153 545 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PLEKHG6Q3KR16 790 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 C10orf76Q5T2E6 689 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 Q6ZSN1 163 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 EPM2AIP1Q7L775 607 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GPRIN1Q7Z2K8 1008 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 NAXDQ8IW45 347 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 RBM12BQ8IXT5 1001 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 FUKQ8N0W3 1084 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 NUP93Q8N1F7 819 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GPD1LQ8N335 351 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CCDC26Q8TAB7 109 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CEP76Q8TAP6 659 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 NOC3LQ8WTT2 800 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CACTINQ8WUQ7 758 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 HNRNPLLQ8WVV9 542 aaKnown RBP4.82□□□□□ -1.64
CKS1B-207ENST00000477676 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 EXOC4Q96A65 974 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 MRGPRX1Q96LB2 322 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 SMOQ99835 787 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 GABRG3Q99928 467 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PANK2Q9BZ23 570 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 SMYD3Q9H7B4 428 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 NMUR1Q9HB89 426 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 SPHK2Q9NRA0 654 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 ST7Q9NRC1 585 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 OLFML3Q9NRN5 406 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 RIC8BQ9NVN3 520 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 SEL1LQ9UBV2 794 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 HMGXB4Q9UGU5 601 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 CLEC4EQ9ULY5 219 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TEX15Q9BXT5 2789 aa4.82□□□□□ -1.64
CKS1B-207ENST00000477676 TRPM6Q9BX84 2022 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 FAM149AA5PLN7 773 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 HHLA1C9JL84 531 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 H3BQV1 296 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CLIC2O15247 247 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TLR5O60602 858 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CLSTN1O94985 981 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 VNN1O95497 513 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 LDHAP00338 332 aaKnown RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 KLKB1P03952 638 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CCDC130P13994 396 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 TYRP14679 529 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 IDEP14735 1019 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 GAP43P17677 238 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ABCD1P33897 745 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 IL12RB1P42701 662 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ETV4P43268 484 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PPP3CCP48454 512 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 PDE6CP51160 858 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 COPAP53621 1224 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 SLC5A3P53794 718 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 ATXN3P54252 364 aaPredicted RBP4.81□□□□□ -1.64
CKS1B-207ENST00000477676 RRADP55042 308 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CLDN6P56747 220 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 MYL6P60660 151 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 CYP24A1Q07973 514 aa4.81□□□□□ -1.64
CKS1B-207ENST00000477676 SLC14A1Q13336 389 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms