RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 DKK3Q9UBP4 350 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 SERGEFQ9UGK8 458 aa15.31■□□□□ 0.04
SNX13-207ENST00000475800 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
SNX13-207ENST00000475800 A0A1W2PQ67 120 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 MEI4A8MW99 385 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 HACD1B0YJ81 288 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
SNX13-207ENST00000475800 UGT2B4P06133 528 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 PYGMP11217 842 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 SERPINA4P29622 427 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 SCNN1BP51168 640 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 SUOXP51687 545 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 ADPRHP54922 357 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 IFI35P80217 286 aaPredicted RBP15.3■□□□□ 0.04
SNX13-207ENST00000475800 AP1B1Q10567 949 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 XRCC4Q13426 336 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 SEL1L2Q5TEA6 688 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 AGBL4Q5VU57 503 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 FBXL19Q6PCT2 694 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 NPNTQ6UXI9 565 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 RABEPKQ7Z6M1 372 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 ZSCAN30Q86W11 494 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 TTC13Q8NBP0 860 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 OR14C36Q8NHC7 312 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 TFB1MQ8WVM0 346 aaKnown RBP15.3■□□□□ 0.04
SNX13-207ENST00000475800 ARRDC3Q96B67 414 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 EXOC2Q96KP1 924 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 NUDCD1Q96RS6 583 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 LGMNQ99538 433 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 EDEM2Q9BV94 578 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 HEMGNQ9BXL5 484 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 POLR1EQ9GZS1 481 aaKnown RBP15.3■□□□□ 0.04
SNX13-207ENST00000475800 PREBQ9HCU5 417 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 CHD8Q9HCK8 2581 aa15.3■□□□□ 0.04
SNX13-207ENST00000475800 BCLAF3A2AJT9 711 aaKnown RBP15.29■□□□□ 0.04
SNX13-207ENST00000475800 C16orf96A6NNT2 1141 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 C4orf47A7E2U8 309 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 METTL12A8MUP2 240 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 PATE3B3GLJ2 98 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 FOXD2O60548 495 aaPredicted RBP15.29■□□□□ 0.04
SNX13-207ENST00000475800 ADRB3P13945 408 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 CR2P20023 1033 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 NUDT1P36639 197 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 CCR5P51681 352 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 METAP1P53582 386 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 BCL2L1Q07817 233 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 LLGL1Q15334 1064 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 POM121L1PQ3SYA9 428 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 PLA2G2CQ5R387 149 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 CFAP58Q5T655 872 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 PIP5KL1Q5T9C9 394 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 KIAA0895LQ68EN5 471 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 ALG1LQ6GMV1 187 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 NEK5Q6P3R8 708 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 BRAT1Q6PJG6 821 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 REXO1L1PQ8IX06 675 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 HSPA12BQ96MM6 686 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 KLHL32Q96NJ5 620 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 CARD9Q9H257 536 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 SUV39H2Q9H5I1 410 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 NT5MQ9NPB1 228 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 VPS45Q9NRW7 570 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 RBM22Q9NW64 420 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNX13-207ENST00000475800 SUSD2Q9UGT4 822 aa15.29■□□□□ 0.04
SNX13-207ENST00000475800 DOCK9Q9BZ29 2069 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 TSPAN11A1L157 253 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 MUSKO15146 869 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 INSIG1O15503 277 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 AP1G1O43747 822 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 SOCS5O75159 536 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
SNX13-207ENST00000475800 CA4P22748 312 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 NFKBIAP25963 317 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 GKP32189 559 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PTGER3P43115 390 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 RGRP47804 291 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 ADCY2Q08462 1091 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PRKD1Q15139 912 aaPredicted RBP15.28■□□□□ 0.04
SNX13-207ENST00000475800 NOMO1Q15155 1222 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 ST3GAL2Q16842 350 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PSAPL1Q6NUJ1 521 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 NCEH1Q6PIU2 408 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PARS2Q7L3T8 475 aaKnown RBP15.28■□□□□ 0.04
SNX13-207ENST00000475800 SYT12Q8IV01 421 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 DEFB119Q8N690 84 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 DNASE2BQ8WZ79 361 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 PIGKQ92643 395 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 HAUS1Q96CS2 278 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 VAT1Q99536 393 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 IL12RB2Q99665 862 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 C6orf106Q9H6K1 298 aaPredicted RBP15.28■□□□□ 0.04
SNX13-207ENST00000475800 KNL1Q8NG31 2342 aa15.28■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3DA0A087WVF3 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3IA0A087WXS9 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3EA0A087X179 549 aa15.27■□□□□ 0.04
SNX13-207ENST00000475800 TBC1D3KA0A087X1G2 549 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms