RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 THAP12O43422 761 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 MMP20O60882 483 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 TM7SF2O76062 418 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 RASGRP1O95267 797 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 PNLIPP16233 465 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 GLB1P16278 677 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 GKP32189 559 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 CCR10P46092 362 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 COBLL1Q53SF7 1204 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 BRMS1LQ5PSV4 323 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 OTUD1Q5VV17 481 aaPredicted RBP19.26■□□□□ 0.67
SORT1-203ENST00000471996 WDTC1Q8N5D0 677 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 EHBP1Q8NDI1 1231 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 OR6K2Q8NGY2 324 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 ISG20Q96AZ6 181 aaKnown RBP19.26■□□□□ 0.67
SORT1-203ENST00000471996 C1orf74Q96LT6 269 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 EPAS1Q99814 870 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 TM6SF2Q9BZW4 377 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 LRRC4CQ9HCJ2 640 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 ATP13A1Q9HD20 1204 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 PIGVQ9NUD9 493 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 ACTL7AQ9Y615 435 aa19.26■□□□□ 0.67
SORT1-203ENST00000471996 TRIM49BA6NDI0 452 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 TMEM110-MUSTN1A8MSY1 372 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 CD160O95971 181 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 GNA15P30679 374 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 CXCR3P49682 368 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 ATP1A2P50993 1020 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 LRRC63Q05C16 580 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 CERCAMQ5T4B2 595 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 PHF19Q5T6S3 580 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 C11orf57Q6ZUT1 292 aaPredicted RBP19.25■□□□□ 0.67
SORT1-203ENST00000471996 FAM183BPQ6ZVS7 135 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 RD3Q7Z3Z2 195 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 TMPRSS9Q7Z410 1059 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 SPRED1Q7Z699 444 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 RYBPQ8N488 228 aaPredicted RBP19.25■□□□□ 0.67
SORT1-203ENST00000471996 NKD1Q969G9 470 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 VOPP1Q96AW1 172 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 ACP6Q9NPH0 428 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 ZNF212Q9UDV6 495 aa19.25■□□□□ 0.67
SORT1-203ENST00000471996 NBASA2RRP1 2371 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 DAB1O75553 588 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 UGT2B4P06133 528 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 C16orf72Q14CZ0 275 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 KLHL40Q2TBA0 621 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 ARTNQ5T4W7 220 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 OGFOD3Q6PK18 319 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 ENPP7Q6UWV6 458 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 OLFML1Q6UWY5 402 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 TTC7BQ86TV6 843 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 CXorf40AQ8TE69 158 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 GTPBP4Q9BZE4 634 aaKnown RBP19.24■□□□□ 0.67
SORT1-203ENST00000471996 SEMA6CQ9H3T2 930 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 RRN3Q9NYV6 651 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 AKAP7Q9P0M2 348 aaPredicted RBP19.24■□□□□ 0.67
SORT1-203ENST00000471996 PLAAQ9Y263 795 aa19.24■□□□□ 0.67
SORT1-203ENST00000471996 CCL4P13236 92 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 HTR1BP28222 390 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 SRP54P61011 504 aaKnown RBP19.23■□□□□ 0.67
SORT1-203ENST00000471996 GNA12Q03113 381 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 PKP1Q13835 747 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 IRF4Q15306 451 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 LRRC73Q5JTD7 316 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 ACBD5Q5T8D3 534 aaPredicted RBP19.23■□□□□ 0.67
SORT1-203ENST00000471996 ZNF658Q5TYW1 1059 aaPredicted RBP19.23■□□□□ 0.67
SORT1-203ENST00000471996 SLC26A9Q7LBE3 791 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 C9orf43Q8TAL5 461 aaPredicted RBP19.23■□□□□ 0.67
SORT1-203ENST00000471996 GPBAR1Q8TDU6 330 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 KLHL32Q96NJ5 620 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 CATSPER2Q96P56 530 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 RBM15Q96T37 977 aaKnown RBP eCLIP19.23■□□□□ 0.672e-7■□□□□ 10.3
SORT1-203ENST00000471996 NPY6RQ99463 290 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 OSBPL1AQ9BXW6 950 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 CDH19Q9H159 772 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 ZNF71Q9NQZ8 489 aaPredicted RBP19.23■□□□□ 0.67
SORT1-203ENST00000471996 RMND1Q9NWS8 449 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 LRIT1Q9P2V4 623 aa19.23■□□□□ 0.67
SORT1-203ENST00000471996 SPENQ96T58 3664 aaKnown RBP19.22■□□□□ 0.67
SORT1-203ENST00000471996 CXorf51AA0A1B0GTR3 108 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 KRIT1O00522 736 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 SRGAP2O75044 1071 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 ZNF202O95125 648 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 LIFP15018 202 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 TFE3P19532 575 aaPredicted RBP19.22■□□□□ 0.67
SORT1-203ENST00000471996 ARSDP51689 593 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 SLC6A3Q01959 620 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 NFATC4Q14934 902 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 CCDC40Q4G0X9 1142 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 HIST2H2BCQ6DN03 193 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 NYAP1Q6ZVC0 841 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 IL22RA1Q8N6P7 574 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 ZNF397Q8NF99 534 aaPredicted RBP19.22■□□□□ 0.67
SORT1-203ENST00000471996 CEP63Q96MT8 703 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 TMPRSS4Q9NRS4 437 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 KLQ9UEF7 1012 aa19.22■□□□□ 0.67
SORT1-203ENST00000471996 ZFC3H1O60293 1989 aaKnown RBP19.22■□□□□ 0.67
SORT1-203ENST00000471996 ENO4A6NNW6 628 aa19.21■□□□□ 0.67
SORT1-203ENST00000471996 POP4O95707 220 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms