RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ZNF806P0C7X5 589 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 CCNB1P14635 433 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 MAPK8P45983 427 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 SCNN1BP51168 640 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 CCR5P51681 352 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 ZNF211Q13398 564 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-220ENST00000471235 SF3A2Q15428 464 aaKnown RBP19.97■□□□□ 0.79
HDAC7-220ENST00000471235 TCEAL6Q6IPX3 200 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 FBXL19Q6PCT2 694 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 CAMK1DQ8IU85 385 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 ZCCHC9Q8N567 271 aaKnown RBP19.97■□□□□ 0.79
HDAC7-220ENST00000471235 TCEAL3Q969E4 200 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 ORAI3Q9BRQ5 295 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 MIR1-1HGQ9H1L0 117 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 ATP13A3Q9H7F0 1226 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 SCUBE2Q9NQ36 999 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 EFR3BQ9Y2G0 817 aa19.97■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3DA0A087WVF3 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3IA0A087WXS9 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3EA0A087X179 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3KA0A087X1G2 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3FA6NER0 549 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3LB9A6J9 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 KCNK1O00180 336 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 AP1G1O43747 822 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 RNGTTO60942 597 aaKnown RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 HLA-DQB2P05538 268 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3HP0C7X1 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 SERPINA4P29622 427 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 NR2C2P49116 596 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 IFI35P80217 286 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 AP1B1Q10567 949 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 ZBTB17Q13105 803 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 PRKD1Q15139 912 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 LRRC73Q5JTD7 316 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3GQ6DHY5 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3CQ6IPX1 549 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 PRR23CQ6ZRP0 262 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 B4GALNT4Q76KP1 1039 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TRIM69Q86WT6 500 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 ZSWIM9Q86XI8 627 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 TBC1D3Q8IZP1 549 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 P3H4Q92791 437 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 ZNF641Q96N77 438 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 ALS2CR12Q96Q35 445 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 IL12RB2Q99665 862 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 SUV39H2Q9H5I1 410 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 RBM22Q9NW64 420 aaKnown RBP eCLIP19.96■□□□□ 0.79
HDAC7-220ENST00000471235 ITM2BQ9Y287 266 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 FADS3Q9Y5Q0 445 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 WDR87Q6ZQQ6 2873 aa19.96■□□□□ 0.79
HDAC7-220ENST00000471235 APOC4-APOC2K7ER74 178 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 LATO43561 262 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 APOC2P02655 101 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 CD27P26842 260 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 BCL2L1Q07817 233 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 ALG1LQ6GMV1 187 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 BZW1Q7L1Q6 419 aaKnown RBP19.95■□□□□ 0.78
HDAC7-220ENST00000471235 KIAA2013Q8IYS2 634 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 GPR161Q8N6U8 529 aaKnown RBP19.95■□□□□ 0.78
HDAC7-220ENST00000471235 C1orf216Q8TAB5 229 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 RAB7BQ96AH8 199 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 ECHDC3Q96DC8 303 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 POLR1EQ9GZS1 481 aaKnown RBP19.95■□□□□ 0.78
HDAC7-220ENST00000471235 BRD8Q9H0E9 1235 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 EBF2Q9HAK2 575 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 NOD2Q9HC29 1040 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 SUSD2Q9UGT4 822 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 AMACRQ9UHK6 382 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 GGT7Q9UJ14 662 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 TTLL3Q9Y4R7 772 aa19.95■□□□□ 0.78
HDAC7-220ENST00000471235 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.95■□□□□ 0.78
HDAC7-220ENST00000471235 PTPRZ1P23471 2315 aaPredicted RBP19.94■□□□□ 0.78
HDAC7-220ENST00000471235 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.94■□□□□ 0.78
HDAC7-220ENST00000471235 A0A1W2PPC4 97 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 A0A1W2PQU0 124 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 UPK3BL1B0FP48 263 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 UPK3BL2E5RIL1 263 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 CFIP05156 583 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 TIMP2P16035 220 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 MAT2AP31153 395 aaKnown RBP19.94■□□□□ 0.78
HDAC7-220ENST00000471235 CETN2P41208 172 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 DSC2Q02487 901 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 TRAF2Q12933 501 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 NOMO1Q15155 1222 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 DUOXA1Q1HG43 343 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 TRIM61Q5EBN2 209 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 RALGPS1Q5JS13 557 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 FAM182AQ5T1J6 154 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 CFAP58Q5T655 872 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 MEI1Q5TIA1 1274 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 BRAT1Q6PJG6 821 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 RABEPKQ7Z6M1 372 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 CEP76Q8TAP6 659 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 HCAR2Q8TDS4 363 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 QKIQ96PU8 341 aaKnown RBP eCLIP19.94■□□□□ 0.78
HDAC7-220ENST00000471235 SEMA3CQ99985 751 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 CEP41Q9BYV8 373 aa19.94■□□□□ 0.78
HDAC7-220ENST00000471235 TPX2Q9ULW0 747 aaKnown RBP19.94■□□□□ 0.78
HDAC7-220ENST00000471235 ZFR2Q9UPR6 939 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms